PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW14906

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 255aa MW: 27152.1 Da PI: 9.479

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW14906	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.1	0.00029	106	128	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k F++ L H +H OIW14906 106 YKCSVCNKAFPSYQALGGHKASH 128 9***********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MAMEALKSPT TATPSFTFQE DNTSHHESAP WAKRKRSKRS RIDHYHPSCT EEEYLAFCLI 60 MLARGGTTTT TTTTTTVSAD KTRTNPTPSN KSATVATATE QSKLSYKCSV CNKAFPSYQA 120 LGGHKASHRR LAGGSGGDNQ PTSSAVTNSS ANTVSSKGGN KTHECSICHK SFPTGQALGG 180 HKRCHYDGGA GGGSSSAITA SEGVGSTHTV SHSHKRDFDL NLPAFPDFAT KFLVEDEVSS 240 PLPMKKPRLF GHSQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	3e-57	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW14906