PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW14096 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 231aa MW: 26357.3 Da PI: 8.8191 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 40.8 | 2.8e-13 | 11 | 51 | 3 | 43 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43 i ++s+r+ t+ kRrng+ KK +E+ +LC++e++ ii ++ OIW14096 11 IASDSKRNATLKKRRNGLWKKINEITTLCGIEACAIISTPD 51 8899********************************98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MTRKKLELTY IASDSKRNAT LKKRRNGLWK KINEITTLCG IEACAIISTP DDLQPEVWPS 60 HLGVQKVLYK FSRIPEMEKS KKMFNQENFL SQSIIKAKEQ LRKLRNENRK KEMSLLMFQC 120 LSSDNSSNNV NMTNLSDLSW LIDLTLKEID QNITKNQPQQ DALVTTNGGE AMKGENTSLD 180 SHVQGMMQIT MDAMQKQNLA MDSINGSGNL MIPTIEFGLS NGMVWNEHYL H |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 3 | 25 | RKKLELTYIASDSKRNATLKKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48670.1 | 2e-46 | M-type_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW14096 |