PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW13708

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

WOX

Protein Properties

Length: 402aa MW: 44794.1 Da PI: 8.4911

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW13708	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.2	1.2e-17	58	118	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ OIW13708 58 KPRWNPKPEQIRILETIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 118 89***************99***********************************995 PP
2	Wus_type_Homeobox	111.9	3.3e-36	57	119	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++k OIW13708 57 PKPRWNPKPEQIRILETIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 119 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MASSNRHWPS MFKSKPKPCN PHHHHWQHDI TSSLISTACN RSPYPSAAGF EERSPEPKPR 60 WNPKPEQIRI LETIFNSGMV NPPRDEIRKI RAQLQEYGQV GDANVFYWFQ NRKSRSKHKL 120 RQQLQNSKNN YQNINPPEQQ QQQQQQENTV SQLTAPSSSS STSEKSPPKE IRPTKVFSSA 180 SDVVMVPNFP TTSVNHNYLP APPPISEAFF FPMQHHGRGV LPNNNSTIPS SSQGFCFSDL 240 SSVVQSQQPH GQHNVGPCTS LLLSEIMNHG AASSKNGQDQ VQDKYVKLMH PYSHLSFCVT 300 PTTEVNIATV MPPPITTTTT VTVPSPINFT QVQGIEDESV TPKSTVLIND VAFEVSVGPF 360 NVRDAFGNDA MLIHSTGHPV PTNHFGVTLH SLHHGASYYL II

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MASSNRHWPS MFKSKPKPCN PHHHHWQHDI TSSLISTACN RSPYPSAAGF EERSPEPKPR  60
WNPKPEQIRI LETIFNSGMV NPPRDEIRKI RAQLQEYGQV GDANVFYWFQ NRKSRSKHKL  120
RQQLQNSKNN YQNINPPEQQ QQQQQQENTV SQLTAPSSSS STSEKSPPKE IRPTKVFSSA  180
SDVVMVPNFP TTSVNHNYLP APPPISEAFF FPMQHHGRGV LPNNNSTIPS SSQGFCFSDL  240
SSVVQSQQPH GQHNVGPCTS LLLSEIMNHG AASSKNGQDQ VQDKYVKLMH PYSHLSFCVT  300
PTTEVNIATV MPPPITTTTT VTVPSPINFT QVQGIEDESV TPKSTVLIND VAFEVSVGPF  360
NVRDAFGNDA MLIHSTGHPV PTNHFGVTLH SLHHGASYYL II

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	2e-61	WOX family protein

Link Out ? help Back to Top
Ensembl	OIW13708