PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW13138

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 178aa MW: 20033.1 Da PI: 5.9219

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW13138	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.00042	34	56	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C+ C++ F++ L H++ H OIW13138 34 YDCTFCKRGFTNAQALGGHMNIH 56 88*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence
MKSVIEGISS ETSTEETDNQ KEDLDDSITS KRSYDCTFCK RGFTNAQALG GHMNIHRKDK 60 AKAKQGISTK NLSMAPSFIP QTSTFYSMFQ SQGNYDIHFQ PSTIPNYPTN PPAYAFQYEF 120 INPTRYESMG ANYQELLGSN LSLQIASSHV SSDEVRKGIQ NDEVVDLELR LSHHPYSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53820.1	7e-15	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW13138