PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW13033 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | NF-YC | ||||||||
Protein Properties | Length: 117aa MW: 13400.4 Da PI: 4.6457 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 127.5 | 4.7e-40 | 1 | 76 | 26 | 101 |
NF-YC 26 ikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdel 101 +kki+k+dedv+misae+Pv +++ace+fileltlrsw+h eenkrrtl+k+dia+a++rtd+fdflvdivpr++l OIW13033 1 MKKIMKTDEDVHMISAEVPVTFARACEMFILELTLRSWNHEEENKRRTLQKNDIATAINRTDMFDFLVDIVPREDL 76 59***********************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 117 aa Download sequence |
MKKIMKTDED VHMISAEVPV TFARACEMFI LELTLRSWNH EEENKRRTLQ KNDIATAINR 60 TDMFDFLVDI VPREDLKDEV LASIPKETIP GAGRLSDGFP YCNMPPQDAP HLELLVS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 46 | 52 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08970.3 | 5e-56 | NF-YC family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW13033 |