PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW12893
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family E2F/DP
Protein Properties Length: 308aa    MW: 34817.4 Da    PI: 9.0677
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW12893genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP72.83.6e-232388171
   E2F_TDP  1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
              rk+ksL+ll+++f kl++++ +g++ l+ +a++L    v  +rRR YD++N+Le+++++++++kn+++wkg
  OIW12893 23 RKDKSLGLLCSNFFKLFNREGTGMIGLDVAANKL---GV--QRRRMYDVVNILESVGIVARRAKNQYSWKG 88
              79********************************...**..****************************98 PP
2E2F_TDP64.71.3e-20127207171
   E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 
               r++ksL llt++f+kl+ +s+ + v l+++ake++ +        +k RR+YDi+NVL+ lnli+k     ++k ++rw g
  OIW12893 127 RRDKSLALLTENFIKLFLCSDVEYVLLEDAAKEMLGDsqnstALTTKTRRLYDIANVLSCLNLIKKtnhpeNRKTAYRWLG 207
               689**********************************9999967789*******************999999999****87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MDNSYSSSSP QLSDSAPPQI YSRKDKSLGL LCSNFFKLFN REGTGMIGLD VAANKLGVQR  60
RRMYDVVNIL ESVGIVARRA KNQYSWKGFK EIPRALKELM ALNEKENGRS ETDIENNPLE  120
SSKTDCRRDK SLALLTENFI KLFLCSDVEY VLLEDAAKEM LGDSQNSTAL TTKTRRLYDI  180
ANVLSCLNLI KKTNHPENRK TAYRWLGCKA ITGSEGSLDQ NASERIFGAE ITNYSLKRNN  240
PDSLMDPRLQ KKARMYHKPG DLENGYNDNI LEHPPRNRSK AIDFGPFAPN KILEHINKSS  300
SGLEDKEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.18e-80E2F/DP family protein