PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW12553
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family Trihelix
Protein Properties Length: 641aa    MW: 71266.9 Da    PI: 6.4158
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW12553genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix92.54.2e-2955139187
  trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
               rW++qe+laL+++r++m+ ++r+++ k+plWe+vs+k++e g++r++k+Ckek+en+ k++k++keg++++++++  t+++fdqlea
  OIW12553  55 RWPRQETLALLRIRSDMDVAFRDASVKGPLWEQVSRKLAEIGYHRNAKKCKEKFENVYKYHKRTKEGRSGKSEGK--TYRFFDQLEA 139
               8********************************************************************975544..6*******85 PP
2trihelix1041.1e-32470555187
  trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
               rW+k ev aLi++r+e++ +++++  k+plWee+s+ mr+ g++r++k+Ckekwen+nk++kk+ke++kkr +++s+tcpyf+ql+a
  OIW12553 470 RWPKVEVEALIKLRTELDAKYQENVPKGPLWEEISSSMRKLGYNRNAKRCKEKWENINKYFKKVKESNKKR-PQDSKTCPYFHQLDA 555
               8*********************************************************************8.99***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 641 aa     Download sequence    
MLGESSSGEA VAVGGGGGGG VVVGGGGGGG GGGSTSGDED RRMEEGERGS FGGNRWPRQE  60
TLALLRIRSD MDVAFRDASV KGPLWEQVSR KLAEIGYHRN AKKCKEKFEN VYKYHKRTKE  120
GRSGKSEGKT YRFFDQLEAL DHLHHPSTTP SPNPPLPSIA PSPLSSIVAT TTVTVPMPQV  180
VNNTTHSCVP HFTVPSTTTG ATTVQSLTMN QGIVVTTTPS ISLPNIPSYP HTNPTIFPTP  240
HPLPPQAATT TNPTTIPISF PNIPNDLLSN SSSSTSSDDE MFEERRKRKR KRKWEDFFHR  300
LMKGVVKKQE EQQRTFLEAI EKREHELMAR EEAWRVQEMQ RINREREILA QERSVAAAKD  360
AAVMAFLQKI AEQQHSGEAL NTINIPTQPQ PQPVAPQTLV PAIVPTLVQP QVQSQQPQLQ  420
LVVQPSPPIQ PVVVPPVPPQ QQQQQQLVMN MEIVRADNNG ENMMGASSSR WPKVEVEALI  480
KLRTELDAKY QENVPKGPLW EEISSSMRKL GYNRNAKRCK EKWENINKYF KKVKESNKKR  540
PQDSKTCPYF HQLDALYREK NKMVQPESMV APLMVQPEQQ WPPQQHREEE DGDDDDFDEE  600
EKDNGEEEEE DEENGSGSSG GKYEVVANKV PSASVGGASG E
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1285290RRKRKR
2285291RRKRKRK
3285293RRKRKRKRK
4286291RKRKRK
5286292RRKRKRK
6287293RRKRKRK
7288293RKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.18e-62Trihelix family protein