PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW12405 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 261aa MW: 30005.6 Da PI: 4.6817 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.4 | 7.8e-21 | 60 | 113 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t++q++ Le+ Fe+++++ e+++eLAkklgL+ rqV vWFqNrRa++k OIW12405 60 KKRRLTSDQVHLLEKSFEEENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWK 113 56789************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 134.6 | 3.4e-43 | 59 | 150 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+++qv+lLE+sFeee+kLeperK+ela++LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd+l ++ +++ k++e+L++e+ OIW12405 59 EKKRRLTSDQVHLLEKSFEEENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKASYDSLLSSYDSIVKDNEKLKSEMV 150 69**************************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MDCGRIFFDT SSCRRNNMLF LGNVGRSMMS MEESSKRRPF FSSPDELFDD EYYEEQLPEK 60 KRRLTSDQVH LLEKSFEEEN KLEPERKTEL AKKLGLQPRQ VAVWFQNRRA RWKTKQLERD 120 YDVLKASYDS LLSSYDSIVK DNEKLKSEMV SLHEKLQNEA KDMPEEEPIS DKKTDTLPVN 180 IAEIIRMKVV EDRLSIGSVG SAVVDEGSPR LVVGSDDGSD DGTSYLSDVF VGHETQHQNN 240 EEGEALGWWG NMLHNGAPVL F |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 108 | 116 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 1e-71 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW12405 |