PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW12365 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | NF-YC | ||||||||
Protein Properties | Length: 240aa MW: 28034 Da PI: 4.6802 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 107.7 | 7.1e-34 | 29 | 129 | 2 | 98 |
NF-YC 2 lksfwekq...iekatdfk.nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 l++fw +q i +++ f+ n++lPl+rik+i+kad+dvkm+sae+P +++kace+fi eltlr+w+ +++++ tl+ dia+av++ ++ fl++ OIW12365 29 LQQFWVQQlldIRNTEAFRnNKQLPLSRIKRIVKADKDVKMVSAEVPLFMAKACEIFIQELTLRAWILTQDKESCTLQNGDIAKAVQKIHVLHFLTNLLHC 129 89******88888999998789*************************************************************************987665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MNLISNSTLL PNQFAFSHSH QQDNEKQSLQ QFWVQQLLDI RNTEAFRNNK QLPLSRIKRI 60 VKADKDVKMV SAEVPLFMAK ACEIFIQELT LRAWILTQDK ESCTLQNGDI AKAVQKIHVL 120 HFLTNLLHCD QLQFYEEMVT TNNQIPQSQM MLMHFDPFTY SFFELEETKA GKEENLASLF 180 DVAGSKENTM TNMGMSTCTC MEDKKENIMD EMEATNQEFP QPRMMLSDFD PFQYNFFQPE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56170.1 | 3e-33 | NF-YC family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW12365 |