PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW11811

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

GRF

Protein Properties

Length: 350aa MW: 39783.8 Da PI: 7.9454

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW11811	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.1	4.3e-25	79	123	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e OIW11811 79 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEV 123 79****************************************985 PP
2	QLQ	53.4	7.7e-19	13	48	1	36
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 s+FT +Q+q+L++Q+l++Ky++ + P+Pp+L+ i+ OIW11811 13 SPFTSTQWQELEQQALIFKYMVTGTPIPPDLIYSIK 48 89*****************************98886 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MMSTSGASVR NRSPFTSTQW QELEQQALIF KYMVTGTPIP PDLIYSIKRS LDSSITSRLF 60 PHQPIGWGCF EMGFGRKVDP EPGRCRRTDG KKWRCSKEAY PDSKYCERHM HRGRNRSRKP 120 VEVSSATSTA STTTNTTPPI PSYNRNNLSM TNPNNINSMI SASPFPFSPL PSSIITSESQ 180 PFSQSYQSSS LNPFFYSQST SSRATDSESD FLSPDATTHQ LFMDSGSYSH NEKDYRHIHG 240 MREGVDERAF FPEASGSART YPDSYQQLSM SSYKPYSNSH FQNMNENTSK QEQHCFVLGT 300 DFKSDRLSKE KETETTTSQK PLHHFFGEWT PKNTDSWLDL ASNSRIQTDD

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MMSTSGASVR NRSPFTSTQW QELEQQALIF KYMVTGTPIP PDLIYSIKRS LDSSITSRLF  60
PHQPIGWGCF EMGFGRKVDP EPGRCRRTDG KKWRCSKEAY PDSKYCERHM HRGRNRSRKP  120
VEVSSATSTA STTTNTTPPI PSYNRNNLSM TNPNNINSMI SASPFPFSPL PSSIITSESQ  180
PFSQSYQSSS LNPFFYSQST SSRATDSESD FLSPDATTHQ LFMDSGSYSH NEKDYRHIHG  240
MREGVDERAF FPEASGSART YPDSYQQLSM SSYKPYSNSH FQNMNENTSK QEQHCFVLGT  300
DFKSDRLSKE KETETTTSQK PLHHFFGEWT PKNTDSWLDL ASNSRIQTDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	3e-67	GRF family protein

Link Out ? help Back to Top
Ensembl	OIW11811