PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW11270

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 206aa MW: 23059.2 Da PI: 7.6952

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW11270	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	126.5	1.3e-39	10	111	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +C aCk+lrrkCa dC++apyf++eq p++fa++hk+FGasnv+kll+++p ++r +a+ +++yeA+ar+rdPvyG+v++i++lqqq+ l+a+l ++k++ OIW11270 10 PCGACKFLRRKCAVDCIFAPYFCSEQgPARFAAIHKVFGASNVSKLLSHIPVHDRCEAIVTIAYEAQARVRDPVYGCVSHIFALQQQVGWLQAQLMQVKSQ 110 7***********************99*****************************************************************999987 PP DUF260 101 l 101 l OIW11270 111 L 111 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MTSSNGTGSP CGACKFLRRK CAVDCIFAPY FCSEQGPARF AAIHKVFGAS NVSKLLSHIP 60 VHDRCEAIVT IAYEAQARVR DPVYGCVSHI FALQQQVGWL QAQLMQVKSQ LAQDMVESRN 120 IENHQWPSGN VSGQQGQPMN PFCHMNPISP QSSLESIDHS NNINDGMVMQ DIQRRDDFSF 180 QACSKKRSHN NDLCELQEIA LRMMRN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	185	189	KKRSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42430.1	3e-75	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW11270