PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW11270 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | LBD | ||||||||
Protein Properties | Length: 206aa MW: 23059.2 Da PI: 7.6952 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 126.5 | 1.3e-39 | 10 | 111 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +C aCk+lrrkCa dC++apyf++eq p++fa++hk+FGasnv+kll+++p ++r +a+ +++yeA+ar+rdPvyG+v++i++lqqq+ l+a+l ++k++ OIW11270 10 PCGACKFLRRKCAVDCIFAPYFCSEQgPARFAAIHKVFGASNVSKLLSHIPVHDRCEAIVTIAYEAQARVRDPVYGCVSHIFALQQQVGWLQAQLMQVKSQ 110 7*************************99*******************************************************************999987 PP DUF260 101 l 101 l OIW11270 111 L 111 5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MTSSNGTGSP CGACKFLRRK CAVDCIFAPY FCSEQGPARF AAIHKVFGAS NVSKLLSHIP 60 VHDRCEAIVT IAYEAQARVR DPVYGCVSHI FALQQQVGWL QAQLMQVKSQ LAQDMVESRN 120 IENHQWPSGN VSGQQGQPMN PFCHMNPISP QSSLESIDHS NNINDGMVMQ DIQRRDDFSF 180 QACSKKRSHN NDLCELQEIA LRMMRN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 185 | 189 | KKRSH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42430.1 | 3e-75 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW11270 |