PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW11087

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 246aa MW: 25684.8 Da PI: 5.6266

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW11087	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.8	0.0016	129	149	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 Cp C+k F+++ H+r+H OIW11087 129 CPLCHKEFNSWKGAFGHMRKH 149 ********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MKNPNHPSGD SNTDRKSPSS SPPQPPLPPS DDNDNSRGRR GRQEATTIMK TALQVLAELA 60 SDDSTNDGGG EGSGGGGVAS MELAVGGGVG GSTVVVQEGV GGSGNQGKRA GKKRKSSDVK 120 DPPSGKPCCP LCHKEFNSWK GAFGHMRKHP ERGYRGFHKP PSFSTPSSLH ARNQGDGEGN 180 STSSQPVGGV LFDLNEPLTA EAESSNADAE RNEAPVSPPH PRPRAEENKL GFDLNELPGD 240 DDNEDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35700.1	4e-15	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW11087