PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW10994

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 505aa MW: 53430.9 Da PI: 8.0871

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW10994	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	59	81	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H OIW10994 59 FVCEICNKGFQRDQNLQLHRRGH 81 89*******************88 PP
2	zf-C2H2	11.9	0.00071	135	157	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + OIW10994 135 WKCEKCSKKYAVQSDWKAHSKIC 157 58*****************9876 PP
3	zf-C2H2	11.2	0.0011	165	183	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr++++ +H + OIW10994 165 DCGTVFSRRDSFITHRAFC 183 9**************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MPLDLDNVST VSGEASVSSS GNQTVPSKTK KKRNLPGMPD PDAEVIALSP KTLMATNRFV 60 CEICNKGFQR DQNLQLHRRG HNLPWKLRQR SSKEVRKRVY VCPEPTCVHH DPSRALGDLT 120 GIKKHFCRKH GEKKWKCEKC SKKYAVQSDW KAHSKICGTR EYKCDCGTVF SRRDSFITHR 180 AFCDALAEES ARSQPQSQTT QTQSAIKANS DSDSKAVTGD DSSPMEVPPL PPPSPPAPPA 240 IPQSNSAALS DLKVQNPELP ENTPQSLEEL QAKNALNGSC STSTNTTSNG VSVFASLFAS 300 STTSENLQSQ TPAFTDLIRA MGRPDHSVDI PGPSFSDPIS LCLGSSMFAT GGQERRQYAP 360 PPQPAMSATA LLQKAAQMGA AATNASLLRG LGIVSSSAST APTQQDSLQW GQRQVEPDSA 420 SISPGLGLPC DSGSGLKELM LGAPSLFGPK QTTLDFLGLG MVAGGTPGGG LSALITSIGG 480 SLDVTAAATS FGNGEFSGED IGRNS

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MPLDLDNVST VSGEASVSSS GNQTVPSKTK KKRNLPGMPD PDAEVIALSP KTLMATNRFV  60
CEICNKGFQR DQNLQLHRRG HNLPWKLRQR SSKEVRKRVY VCPEPTCVHH DPSRALGDLT  120
GIKKHFCRKH GEKKWKCEKC SKKYAVQSDW KAHSKICGTR EYKCDCGTVF SRRDSFITHR  180
AFCDALAEES ARSQPQSQTT QTQSAIKANS DSDSKAVTGD DSSPMEVPPL PPPSPPAPPA  240
IPQSNSAALS DLKVQNPELP ENTPQSLEEL QAKNALNGSC STSTNTTSNG VSVFASLFAS  300
STTSENLQSQ TPAFTDLIRA MGRPDHSVDI PGPSFSDPIS LCLGSSMFAT GGQERRQYAP  360
PPQPAMSATA LLQKAAQMGA AATNASLLRG LGIVSSSAST APTQQDSLQW GQRQVEPDSA  420
SISPGLGLPC DSGSGLKELM LGAPSLFGPK QTTLDFLGLG MVAGGTPGGG LSALITSIGG  480
SLDVTAAATS FGNGEFSGED IGRNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-154	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW10994