PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW10856

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

GATA

Protein Properties

Length: 659aa MW: 73937.1 Da PI: 6.0311

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW10856	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	36.4	7.4e-12	182	208	9	35
GATA 9 TplWRrgpdgnktLCnaCGlyyrkkgl 35 TplWR+gp +++ LCnaCG ++r kg+ OIW10856 182 TPLWRNGPPQKPVLCNACGSRWRTKGT 208 9*****88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 659 aa Download sequence
ELDKQTFCDL KVANNTESYV AFKVKTTSPK KYFVRPNTGL IQPWDSCIIR VTLQAQHEYP 60 PDMQCKDKFL LQSTVVNSNT DVDELPPDTF TKESGNTIEE MKLRVAYISP NSPQGSSEDD 120 VLKNSSQKFD ASSSQALQQL KEERDAAARQ TRQLQQELDM LKRRRSRSDP GFSFIFAIFV 180 GTPLWRNGPP QKPVLCNACG SRWRTKGTLA NYTPLHAREE GDDYEDQRVS RVKSMPLNMI 240 KEVKSLKRKL NNDSVVYGGL SPDYNLGFRK ALNEVTNNRS SSGSTVSNSE SCAQFSGTDA 300 SDLTGPVQPV VWDTMVPSKK RTCVGRPEPS SVEKLTKDLC TILHEQQSYF SASSEEDLLF 360 ESETPMVSVE IGHGTILMRH PSYIAREEES EASSLSIDNK QCAVNNAYLY PGAILMHNDS 420 SGMNFSSQGV EKDVVNYEEF LKNLTDAEQQ QLLKFLPVVD AVKLPDSLKF MFNSSQFKEN 480 LTYFQQLLAE GVFDISLSGT KPEDCKTLKR HALSNLSKSK WVEHYYFLKR CKTRSGKSVT 540 LGSNGTVSSY VAHVKRMCEN QNQNSPELKT IMRSPKRVVA KAGYEGKEVV EDGSHYSPKS 600 LFALPPEASS LFLDSSNFVE ESSDQDLLLE ELLHLEQMGS INCYITDFKL LSSQPDSSI

Sequence ? help Back to Top

Protein Sequence Length: 659 aa Download sequence

ELDKQTFCDL KVANNTESYV AFKVKTTSPK KYFVRPNTGL IQPWDSCIIR VTLQAQHEYP  60
PDMQCKDKFL LQSTVVNSNT DVDELPPDTF TKESGNTIEE MKLRVAYISP NSPQGSSEDD  120
VLKNSSQKFD ASSSQALQQL KEERDAAARQ TRQLQQELDM LKRRRSRSDP GFSFIFAIFV  180
GTPLWRNGPP QKPVLCNACG SRWRTKGTLA NYTPLHAREE GDDYEDQRVS RVKSMPLNMI  240
KEVKSLKRKL NNDSVVYGGL SPDYNLGFRK ALNEVTNNRS SSGSTVSNSE SCAQFSGTDA  300
SDLTGPVQPV VWDTMVPSKK RTCVGRPEPS SVEKLTKDLC TILHEQQSYF SASSEEDLLF  360
ESETPMVSVE IGHGTILMRH PSYIAREEES EASSLSIDNK QCAVNNAYLY PGAILMHNDS  420
SGMNFSSQGV EKDVVNYEEF LKNLTDAEQQ QLLKFLPVVD AVKLPDSLKF MFNSSQFKEN  480
LTYFQQLLAE GVFDISLSGT KPEDCKTLKR HALSNLSKSK WVEHYYFLKR CKTRSGKSVT  540
LGSNGTVSSY VAHVKRMCEN QNQNSPELKT IMRSPKRVVA KAGYEGKEVV EDGSHYSPKS  600
LFALPPEASS LFLDSSNFVE ESSDQDLLLE ELLHLEQMGS INCYITDFKL LSSQPDSSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.2	1e-115	GATA family protein

Link Out ? help Back to Top
Ensembl	OIW10856