PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW09977
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 340aa    MW: 39094.4 Da    PI: 8.4146
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW09977genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF57.22.1e-181051243
              ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
    SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
               i+ +  r++tf kR+ng++KK +E S+LC+++v++ii++++
  OIW09977 10 VIKKEKARKTTFQKRKNGLMKKVYEFSTLCGVDVCLIIYAPD 51
              5888999********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MGRGRIPMEV IKKEKARKTT FQKRKNGLMK KVYEFSTLCG VDVCLIIYAP DFDDQGDAEF  60
ETWPHDTREV HRIIQKYNNT TSDRRPRIYD VQEYFKDRMK KVEAEISKVH KEKHKIMYPT  120
WDESFNGLGE EQLRMFVSSL DAKLNTCNQR INMLKGDIGK GKIAEPNKAG LVTPYLASKP  180
SNHLNFLLNM PQGQFYPSPM KPISDNINNQ LAFYPYQFGQ ISQTNMLHFG QNCLQLMGPN  240
GMSDCVGGQF GGVTYDPKTA MLKDYEAENN ENISPYYYNG NVHTMQPYNI MQSFPSQNSQ  300
YEAAFNTPPN LSPSQGFAPH TFYDTNMLQA HILNDMHGRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.13e-26M-type_MADS family protein