PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW09154

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 506aa MW: 56900.8 Da PI: 9.5707

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW09154	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	135.5	2e-42	39	138	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrr+Ca++Cvlapyfp ++p+kf ++hk+FGasn++k+l++lpe++r da++s+vyeA ar+rdP+yG++gvi +lq+q++ql+++la++++e OIW09154 39 PCAACKILRRRCAEKCVLAPYFPPNEPAKFTFAHKVFGASNIIKFLQELPESQRADAVTSMVYEAGARIRDPIYGCAGVICNLQKQINQLQTQLAKTQAE 138 7**********************************************************************************************99976 PP
2	DUF260	57.2	4.8e-18	273	344	28	100
DUF260 28 kkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 ++ h+++ ++++++ k+lpe++r da++s+vyeA ar+rdP+yG++gvi +lq+q++ql+++la++++e OIW09154 273 ARVTRHHQMHQMHQLHQ-AKELPESQRADAVTSMVYEAGARIRDPIYGCAGVICNLQKQINQLQTQLAKTQAE 344 45566677777777765.5788**********************************************99976 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MDFNDTNTPN SSPFSHSFPT IYTSFPPQPI APTQVVMNPC AACKILRRRC AEKCVLAPYF 60 PPNEPAKFTF AHKVFGASNI IKFLQELPES QRADAVTSMV YEAGARIRDP IYGCAGVICN 120 LQKQINQLQT QLAKTQAEVV NMQLQQANLV ALICMQMAPQ QSLDNFISNG HNGNLNLVID 180 NVISCLPRTN MLKTNGAMTS LKLMPTTPML MPIAAKPEIN MRTLGIIKIS NIVYVPNMVN 240 VLFLIKTDWV DQDIALHQLR QVKVLRQLHM HQARVTRHHQ MHQMHQLHQA KELPESQRAD 300 AVTSMVYEAG ARIRDPIYGC AGVICNLQKQ INQLQTQLAK TQAEVVNMQL QQANLVALIC 360 MQMAPQQSLD NFISNGHNGN LNLVIDNVIS CLPRTNMLKT NGAMTSLKLM PTTPMLMPIA 420 AKPEINMRTL GIIKISNIVY VPNMVNVLFL IKTDWVDQDI ALHQLRQVKV LRQLHMHQAR 480 VTRHHQMHQM HQLHQAKVVP CTTQAI

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MDFNDTNTPN SSPFSHSFPT IYTSFPPQPI APTQVVMNPC AACKILRRRC AEKCVLAPYF  60
PPNEPAKFTF AHKVFGASNI IKFLQELPES QRADAVTSMV YEAGARIRDP IYGCAGVICN  120
LQKQINQLQT QLAKTQAEVV NMQLQQANLV ALICMQMAPQ QSLDNFISNG HNGNLNLVID  180
NVISCLPRTN MLKTNGAMTS LKLMPTTPML MPIAAKPEIN MRTLGIIKIS NIVYVPNMVN  240
VLFLIKTDWV DQDIALHQLR QVKVLRQLHM HQARVTRHHQ MHQMHQLHQA KELPESQRAD  300
AVTSMVYEAG ARIRDPIYGC AGVICNLQKQ INQLQTQLAK TQAEVVNMQL QQANLVALIC  360
MQMAPQQSLD NFISNGHNGN LNLVIDNVIS CLPRTNMLKT NGAMTSLKLM PTTPMLMPIA  420
AKPEINMRTL GIIKISNIVY VPNMVNVLFL IKTDWVDQDI ALHQLRQVKV LRQLHMHQAR  480
VTRHHQMHQM HQLHQAKVVP CTTQAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	7e-66	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW09154