PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW08997

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 193aa MW: 22048.2 Da PI: 7.7485

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW08997	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	123.9	8e-39	13	111	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 aCaaCk++rrkC+++C++apyfp++++k+f n+hklFG+ ++ +l+k l+ +r++ams+++ye+++ra+dPv G+vg i+++ +q+++ +ael + + OIW08997 13 ACAACKYQRRKCPSNCIFAPYFPHDRQKQFLNAHKLFGVGKINNLIKPLDAVQRDIAMSTIIYESNMRANDPVGGCVGCIHRICSQIARYEAELRIVLQ 111 7********************************************************************************************998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MKSHYNNTKK SQACAACKYQ RRKCPSNCIF APYFPHDRQK QFLNAHKLFG VGKINNLIKP 60 LDAVQRDIAM STIIYESNMR ANDPVGGCVG CIHRICSQIA RYEAELRIVL QHLVFFRAQY 120 QPITESVQYD PYIADNIINV NDDVIPFHES DIHFQEQLKL LSRENAIKDG IAVENVNACD 180 VQNSNSGLYL EIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	2e-42	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW08997