PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW08678 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | DBB | ||||||||
Protein Properties | Length: 237aa MW: 26070.4 Da PI: 4.7182 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 22.8 | 1.9e-07 | 4 | 44 | 5 | 39 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC++C +e H H++ OIW08678 4 QCDVCEKAPATVICCADEAALCAKCDVEVHAAnrlaskHQR 44 7*****************************55667777765 PP | |||||||
2 | zf-B_box | 28.2 | 3.9e-09 | 53 | 94 | 2 | 37 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + ++C+ +++k + +fC +++ l+C+dC + +H+ H OIW08678 53 KLPRCDICQDKAAFIFCVEDRALFCKDCDEPIHSAgslssnH 94 789******************************656666666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MKIQCDVCEK APATVICCAD EAALCAKCDV EVHAANRLAS KHQRLLLQCL PNKLPRCDIC 60 QDKAAFIFCV EDRALFCKDC DEPIHSAGSL SSNHQRFLAT GIRVALSSNC PKGDEKSHSE 120 PSNPSVQPAH VKTPQQVPSF TSSWAVDDIL ELTDFESPGK KGSLEFGELE WLADEDLFSE 180 QFPQEALAAA EVPQIPVMHT SSVTSYKASK SYMSYKKPRI EVLDEDDNEH CTVPDLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06040.1 | 5e-88 | DBB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW08678 |