PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW08470

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

E2F/DP

Protein Properties

Length: 457aa MW: 50669.4 Da PI: 4.5575

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW08470	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	85.4	4.3e-27	142	207	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg OIW08470 142 RYDSSLSLLTKKFINLIKQAEDGILDLNNAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 207 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MSGTTPPPSA ASVPSDQIMH SMKRQLPFSS MKPLFVAAGD YHRFAPDRRR NVDQPAEALV 60 VKSHKLKRKN EVADFEAHSG DSMNLGSTEA ANTPFQPPVS AKTGKGSKSS RLTKCSGYGP 120 ETPGSNIGSP SGNNLTPAGP CRYDSSLSLL TKKFINLIKQ AEDGILDLNN AADTLEVQKR 180 RIYDITNVLE GIGLIEKKLK NRIQWKGLDV SRPEEAEDSF SSLQAEVENL AMEECRLDEQ 240 IREMQERLRD LSEDENNEKL LFVTEEDIKN LPCFQNETLI VIKAPHGTTL EVPDPDEAVD 300 YPQRRYRMVL RSTMGPIDVY LVSQFEEKFE EINGVEVAPK FPPTPEFSKQ QPILVTNDRG 360 KGIAEDRGKG IEVQGQDEHG PSSDFTIAQD FSDADYWLLS DADVSITDMW RTESGLEWNE 420 LDSTLQEDDR VTHEPPAAPT HPPNASEAPA TSNRTGG

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MSGTTPPPSA ASVPSDQIMH SMKRQLPFSS MKPLFVAAGD YHRFAPDRRR NVDQPAEALV  60
VKSHKLKRKN EVADFEAHSG DSMNLGSTEA ANTPFQPPVS AKTGKGSKSS RLTKCSGYGP  120
ETPGSNIGSP SGNNLTPAGP CRYDSSLSLL TKKFINLIKQ AEDGILDLNN AADTLEVQKR  180
RIYDITNVLE GIGLIEKKLK NRIQWKGLDV SRPEEAEDSF SSLQAEVENL AMEECRLDEQ  240
IREMQERLRD LSEDENNEKL LFVTEEDIKN LPCFQNETLI VIKAPHGTTL EVPDPDEAVD  300
YPQRRYRMVL RSTMGPIDVY LVSQFEEKFE EINGVEVAPK FPPTPEFSKQ QPILVTNDRG  360
KGIAEDRGKG IEVQGQDEHG PSSDFTIAQD FSDADYWLLS DADVSITDMW RTESGLEWNE  420
LDSTLQEDDR VTHEPPAAPT HPPNASEAPA TSNRTGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-140	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	OIW08470