PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW07212

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 542aa MW: 62401.8 Da PI: 5.9342

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW07212	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.3	7.7e-05	364	401	13	55
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R++i +++ eLre++P+ +K s Le++ +Y+ +Lq OIW07212 364 RQQIQDCIKELREIIPNG-----EKYSIDLLLEETHKYMGYLQ 401 89**************96.....58888888899999988887 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MEKDKVEEVV DMKSCGLWRC SEKVTTWRGD LITPVVEESE EDDVGRRRLR SCFVKYIDIT 60 ISPSMEMRKV EILTLRNKLK ALCTYGDDGE DGSSYAIFWS FHPQNPLIIG KAAFTGKQWV 120 HSDDQNQRWN LSGQNIFETT VAIPIKACGV VQFGSRKKIL ENVEFLEQTQ RLLMEMDNVG 180 MVDMSGNAVS PLDCEDYDLN SLLASFSSEN LYDSTHKYAH SENSEDIMRK VYSSEKTLSG 240 EASCNPLNSS NFEHEFSPNK RQAVEFAPTN IYPIQFGHRA RPTEATSDLM GSISYLEKTN 300 NLARKKDTFP ELQVPRWIDD GHSINIGKVV PAHHQTHKPE EGTTKRTKKR ARPKESTRPQ 360 PKDRQQIQDC IKELREIIPN GEKYSIDLLL EETHKYMGYL QSLTKYADKL QEPIEQKANE 420 VALEDRNVEH PIIVEDMNTP GLMRIEFLCK DKGHFLEIAE TIRDIRLNIL IATMEPRKNK 480 LWGYFIVAEK QILECNNIVQ QAKRHLTSKD VFYFLFDLLQ QTYTSRMDSA NNIANDIVLE 540 KQ

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MEKDKVEEVV DMKSCGLWRC SEKVTTWRGD LITPVVEESE EDDVGRRRLR SCFVKYIDIT  60
ISPSMEMRKV EILTLRNKLK ALCTYGDDGE DGSSYAIFWS FHPQNPLIIG KAAFTGKQWV  120
HSDDQNQRWN LSGQNIFETT VAIPIKACGV VQFGSRKKIL ENVEFLEQTQ RLLMEMDNVG  180
MVDMSGNAVS PLDCEDYDLN SLLASFSSEN LYDSTHKYAH SENSEDIMRK VYSSEKTLSG  240
EASCNPLNSS NFEHEFSPNK RQAVEFAPTN IYPIQFGHRA RPTEATSDLM GSISYLEKTN  300
NLARKKDTFP ELQVPRWIDD GHSINIGKVV PAHHQTHKPE EGTTKRTKKR ARPKESTRPQ  360
PKDRQQIQDC IKELREIIPN GEKYSIDLLL EETHKYMGYL QSLTKYADKL QEPIEQKANE  420
VALEDRNVEH PIIVEDMNTP GLMRIEFLCK DKGHFLEIAE TIRDIRLNIL IATMEPRKNK  480
LWGYFIVAEK QILECNNIVQ QAKRHLTSKD VFYFLFDLLQ QTYTSRMDSA NNIANDIVLE  540
KQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	2e-29	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW07212