PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW07117

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 512aa MW: 56307.5 Da PI: 7.9938

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW07117	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00014	90	110	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k F r nL+ H r H OIW07117 90 CEICNKGFQRDQNLQLHRRGH 110 *******************88 PP
2	zf-C2H2	11.2	0.0012	164	186	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + OIW07117 164 WKCDKCSKKYAVQSDWKAHSKIC 186 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MSNITSCDSG SFSTENTRED AVKQQLEILG QFNSPHSHTT TNNNSNVSNT SLQQPPSAKR 60 KRSLPGNPDP KAEVIALSPN ALMATNRFLC EICNKGFQRD QNLQLHRRGH NLPWKLKQRT 120 STEIIKRVYV CPEPSCVHHN PARALGDLTG IKKHFCRKHG EKKWKCDKCS KKYAVQSDWK 180 AHSKICGTRE YKCDCGTLFS RRDSFITHRA FCDALAEDNK GNEEQLSKMG SNLQCQPMPN 240 LVPSLPINTN IIPNPQVGGT TSEFNNHSDQ RHNPLSSLPN PATSKPFNNN MEMRNTCPSL 300 HLSSNLLASH EGSSLMSATV LLQKAAQMGA TLSNNNSNIA TTMAPLSFGS MVQLQQQQQP 360 DSVHSFMNHY MQQQQQDHVS SQYNNFNANH DMSTGDNEGS VAGMNGVDMF NVIYDQSKAL 420 SKIIEQNNRS INSGVLHQKN GGSSSGATSI GGSKGSGDVM TLDLLGTGGG GDRNLNIYDG 480 AQHAETSAED EVWRNWSNKN EDFESFSASS SM

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MSNITSCDSG SFSTENTRED AVKQQLEILG QFNSPHSHTT TNNNSNVSNT SLQQPPSAKR  60
KRSLPGNPDP KAEVIALSPN ALMATNRFLC EICNKGFQRD QNLQLHRRGH NLPWKLKQRT  120
STEIIKRVYV CPEPSCVHHN PARALGDLTG IKKHFCRKHG EKKWKCDKCS KKYAVQSDWK  180
AHSKICGTRE YKCDCGTLFS RRDSFITHRA FCDALAEDNK GNEEQLSKMG SNLQCQPMPN  240
LVPSLPINTN IIPNPQVGGT TSEFNNHSDQ RHNPLSSLPN PATSKPFNNN MEMRNTCPSL  300
HLSSNLLASH EGSSLMSATV LLQKAAQMGA TLSNNNSNIA TTMAPLSFGS MVQLQQQQQP  360
DSVHSFMNHY MQQQQQDHVS SQYNNFNANH DMSTGDNEGS VAGMNGVDMF NVIYDQSKAL  420
SKIIEQNNRS INSGVLHQKN GGSSSGATSI GGSKGSGDVM TLDLLGTGGG GDRNLNIYDG  480
AQHAETSAED EVWRNWSNKN EDFESFSASS SM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-99	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW07117