PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW06559
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family GRAS
Protein Properties Length: 478aa    MW: 54931.5 Da    PI: 6.2721
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW06559genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS286.76.6e-88914761374
      GRAS   1 lvelLlecAeavssgdle..laqalLarlsel...aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
               l++lLl+ A+ v++++ +  +  ++L+++ el   +s +gd++qR++ayft +L arl+   s  y+ l  ++t+    +ee+ a++ ++ vsP+++f+h+
  OIW06559  91 LIHLLLTTATLVDENNDNknKFGSALENITELykiVSITGDSVQRVVAYFTDGLVARLLTRNSPFYDMLMEEPTT----EEEFLAFTNLYRVSPYYQFAHF 187
               689*********99665544444555555554444*************************9*****999988887....688889999************* PP

      GRAS  97 taNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlvakrledl 189
               taNqaIle +e+e     +++H++Dfd+s+G+QWp+L+q+L++++  ++  slRiTg+g+    + +el+et++rL +f + + ++ fef+ l    l   
  OIW06559 188 TANQAILEVFEKEedknnRALHVVDFDVSYGFQWPSLIQSLSEKAtsGNRISLRITGFGK----NLKELQETESRLISFSKGFgNLVFEFQGL----LRGS 280
               ***********9988777788**********************99755566*********....99***************99459******8....7777 PP

      GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsleaklpreseerikvErel 289
               ++ +Lr k++E++aVnl+  l +l     +  + ++++L +v s +P +vv+veqe ++  + +Fl rf+++l+y++a+fdsl+  lp es er  +E++l
  OIW06559 281 RVINLRKKKNETVAVNLISYLNTLS----CFMK-ISDTLGFVHSFNPSIVVLVEQEGSRsPNRTFLSRFTDTLHYFAAMFDSLDDCLPLESTERFRIEKKL 376
               8899***************999997....3333.578*******************9998899************************************** PP

      GRAS 290 lgreivnvvacegae..rrerhetlekWrerleeaGFkpvplsekaakqaklllrkv........ksdg...yrveee.sgslv.lgWkdrpLvsvSaWr 374
               lg+ei++++     +     + e++e+W++r+e+ GF   ++s+k + qaklll++         +++g   +rv e+ +g ++ lgW++  L++vSaW+
  OIW06559 377 LGKEIKSMLNYYDMDgvDCPKYERMETWKARMENHGFVGTKISSKSMIQAKLLLKMRthycplqfEEEGgggFRVSERdEGRAIsLGWQNTFLLTVSAWK 476
               *********98777733467999*******************************9852222221122223348887664555557**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    
MEDSDEDELL NLTLSVAADR ERKKKGKIKI RDDNIACSIS TTTTHNMNPY YEEGYEGKIY  60
RLLQMRDQML RQDHRIRNKG VVDEDGNGLP LIHLLLTTAT LVDENNDNKN KFGSALENIT  120
ELYKIVSITG DSVQRVVAYF TDGLVARLLT RNSPFYDMLM EEPTTEEEFL AFTNLYRVSP  180
YYQFAHFTAN QAILEVFEKE EDKNNRALHV VDFDVSYGFQ WPSLIQSLSE KATSGNRISL  240
RITGFGKNLK ELQETESRLI SFSKGFGNLV FEFQGLLRGS RVINLRKKKN ETVAVNLISY  300
LNTLSCFMKI SDTLGFVHSF NPSIVVLVEQ EGSRSPNRTF LSRFTDTLHY FAAMFDSLDD  360
CLPLESTERF RIEKKLLGKE IKSMLNYYDM DGVDCPKYER METWKARMEN HGFVGTKISS  420
KSMIQAKLLL KMRTHYCPLQ FEEEGGGGFR VSERDEGRAI SLGWQNTFLL TVSAWKPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.15e-53GRAS family protein