PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW06492

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 473aa MW: 52118.2 Da PI: 5.3024

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW06492	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36	1.2e-11	288	330	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L OIW06492 288 LAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKDL 330 58*******************66......**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MESEILKTHW FEEPQDLLPP WTNNNNNNNN LINDDVSSFK SFLQVGDWFM NSTLNNDIAF 60 TSNQNQNFAI QPLNPSSSNA SSPSTISHTP FFNLNTNNNP FTNDFDYGSE PVLPNSNSNL 120 LMGFNANVNT LELSSNMGFN PTRDVELSGG FNNNTMGMVE ENFHGSGPSI SMFSNNVNVL 180 QQQSIEIPAP AAVPPHPVTL FQKRRRGSDD KLGALEIRAA TRLAAMKAEE GLNDHDDGDD 240 DDDIVEIDKY EENLNSGGSN FNGNNSSGDN NGGILKGKKK VVPAKNLLAE RRRRKKLNDR 300 LYMLRSVVPK ISKMDRASIL GDAIEYLKDL KQKVNVLHNE LQSVPSGSSG TVTPSSSFHS 360 VTPTPPTLPS RVKDELCLSN LSSPKGHSPK VEVRLSEERA INIHMFCARK PGLFLSTMSA 420 LDSLGLDVQQ AVISCFNGFA LDVFRAEQCR DQNLLPEQIK AMLLQATGFH GMM

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MESEILKTHW FEEPQDLLPP WTNNNNNNNN LINDDVSSFK SFLQVGDWFM NSTLNNDIAF  60
TSNQNQNFAI QPLNPSSSNA SSPSTISHTP FFNLNTNNNP FTNDFDYGSE PVLPNSNSNL  120
LMGFNANVNT LELSSNMGFN PTRDVELSGG FNNNTMGMVE ENFHGSGPSI SMFSNNVNVL  180
QQQSIEIPAP AAVPPHPVTL FQKRRRGSDD KLGALEIRAA TRLAAMKAEE GLNDHDDGDD  240
DDDIVEIDKY EENLNSGGSN FNGNNSSGDN NGGILKGKKK VVPAKNLLAE RRRRKKLNDR  300
LYMLRSVVPK ISKMDRASIL GDAIEYLKDL KQKVNVLHNE LQSVPSGSSG TVTPSSSFHS  360
VTPTPPTLPS RVKDELCLSN LSSPKGHSPK VEVRLSEERA INIHMFCARK PGLFLSTMSA  420
LDSLGLDVQQ AVISCFNGFA LDVFRAEQCR DQNLLPEQIK AMLLQATGFH GMM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	278	296	KKKVVPAKNLLAERRRRKK
2	290	297	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	2e-88	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW06492