PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW06273

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 581aa MW: 67528.8 Da PI: 5.7204

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW06273	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	92.3	4.9e-29	145	230	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r++++ +++++++k+p W+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea OIW06273 145 RWPRQETLTLLEIRSRLDPKFKEANQKGPVWDEVSRIMsEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 230 8***********************************999*************************98..55667*****85 PP
2	trihelix	37.7	5.5e-12	452	511	20	82
trihelix 20 rlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 rl++ + ++ Wee+++km g+er++ +Ckekwe++++ y + ++++kk+ + s+c+++ OIW06273 452 RLQQLRDEMETWEEIANKMTCFGYERTAFMCKEKWESISRNYYAKERNKKKK---EYSRCSFY 511 3344458899*****************************9998766666653...44578887 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MDMEDHHNYN HHYHNYDHEE KYGITDLRQL ISEPRSATHF TSTPLPPQPT AELFPSHHRN 60 LTPLHQQHYE MMMFGRDIMP CTTTLHDFPS TTDSVAPAGS ITVGYVATTT AAAGAATASA 120 STPPLSGGLE AETACCIGGD ASTGRWPRQE TLTLLEIRSR LDPKFKEANQ KGPVWDEVSR 180 IMSEEHGYQR SGKKCREKFE NLYKYYKKTK EGKAGRQDGK HYRFFRQLEA LYGESINHSS 240 VPETNFCSNI RLKTSNINTP YEANHENCCL SFNNSTDFDT SSSDDDDDND HNNSIEGLME 300 INNESMLEKR RNKRKSGRSW KVKIEDLIDS QMRKLMEKQE EWLNKLMETM EQKEKERVLR 360 EEEWRKQEVN RLEREHKFWA KERVWTEARD VALIESLQQL TGREIKGSEA NERVEVAAEM 420 RNNSGNQNED VIEILNSTVE VDDSWKEPEI TRLQQLRDEM ETWEEIANKM TCFGYERTAF 480 MCKEKWESIS RNYYAKERNK KKKEYSRCSF YLENNDQSSL YKEGSTYCDI NDHQRPQTND 540 GSSPSITNVG HADTCFPFLM SEGVNLWENY GLKLNKNNQN H

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MDMEDHHNYN HHYHNYDHEE KYGITDLRQL ISEPRSATHF TSTPLPPQPT AELFPSHHRN  60
LTPLHQQHYE MMMFGRDIMP CTTTLHDFPS TTDSVAPAGS ITVGYVATTT AAAGAATASA  120
STPPLSGGLE AETACCIGGD ASTGRWPRQE TLTLLEIRSR LDPKFKEANQ KGPVWDEVSR  180
IMSEEHGYQR SGKKCREKFE NLYKYYKKTK EGKAGRQDGK HYRFFRQLEA LYGESINHSS  240
VPETNFCSNI RLKTSNINTP YEANHENCCL SFNNSTDFDT SSSDDDDDND HNNSIEGLME  300
INNESMLEKR RNKRKSGRSW KVKIEDLIDS QMRKLMEKQE EWLNKLMETM EQKEKERVLR  360
EEEWRKQEVN RLEREHKFWA KERVWTEARD VALIESLQQL TGREIKGSEA NERVEVAAEM  420
RNNSGNQNED VIEILNSTVE VDDSWKEPEI TRLQQLRDEM ETWEEIANKM TCFGYERTAF  480
MCKEKWESIS RNYYAKERNK KKKEYSRCSF YLENNDQSSL YKEGSTYCDI NDHQRPQTND  540
GSSPSITNVG HADTCFPFLM SEGVNLWENY GLKLNKNNQN H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	497	503	ERNKKKK
2	498	504	RNKKKKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	1e-120	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW06273