PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW06250

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 443aa MW: 50766.6 Da PI: 6.3304

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW06250	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	76.9	3.1e-24	120	214	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 +Wt+++v+++i+a+++++e+ + ++k++W+ +sk+m+erg+++sp+qC++k+++lnkrykk++++ +++ +++++++ +++d + OIW06250 120 KWTDKMVRLMITAVSYIGEDATCDGggrrkfavlQRKGKWKCISKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGtSCQVVENPALLDVI 214 7************9999998543345667778********************************************569999888887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MEGDLSQGGI IQGATSFGSF DLPEPMQVHP LGQHPHMMNQ HQAHPCGGSL VHPSIHEGFP 60 FTTGTLHSCD QTMSVAEFSK GGISKNSASD EDEPSFNEDS GEGHHEAAGG KNGSPWHRMK 120 WTDKMVRLMI TAVSYIGEDA TCDGGGRRKF AVLQRKGKWK CISKVMAERG YHVSPQQCED 180 KFNDLNKRYK KLNDMLGRGT SCQVVENPAL LDVIDYLTEK EKDDVRKTLS SKQLFYEEMC 240 SYHNNNRLHL PHDPALQRSL QLALRNRDDH DNDEIRRSNH DEDDQDFETE GHDFEENYAS 300 HGDSRGMYMS LGGAMKKLKQ GQGQDDATTF GNSFNCQEHN KSSHAHGQMV QSDMNQALPE 360 SMRAAWLQQK RWIEYRSLQL EEQKLQIQAE MLELEKQRYK WQKFSHKKDR QLEKMKMENE 420 RMTIENERLA LDLKRKEMEA GFD

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MEGDLSQGGI IQGATSFGSF DLPEPMQVHP LGQHPHMMNQ HQAHPCGGSL VHPSIHEGFP  60
FTTGTLHSCD QTMSVAEFSK GGISKNSASD EDEPSFNEDS GEGHHEAAGG KNGSPWHRMK  120
WTDKMVRLMI TAVSYIGEDA TCDGGGRRKF AVLQRKGKWK CISKVMAERG YHVSPQQCED  180
KFNDLNKRYK KLNDMLGRGT SCQVVENPAL LDVIDYLTEK EKDDVRKTLS SKQLFYEEMC  240
SYHNNNRLHL PHDPALQRSL QLALRNRDDH DNDEIRRSNH DEDDQDFETE GHDFEENYAS  300
HGDSRGMYMS LGGAMKKLKQ GQGQDDATTF GNSFNCQEHN KSSHAHGQMV QSDMNQALPE  360
SMRAAWLQQK RWIEYRSLQL EEQKLQIQAE MLELEKQRYK WQKFSHKKDR QLEKMKMENE  420
RMTIENERLA LDLKRKEMEA GFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-169	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW06250