PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW06249

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 683aa MW: 75270.2 Da PI: 5.7162

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW06249	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	92.7	3.7e-29	73	156	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++qe+laL+++r++m+ ++r+++ k+plWee+s+k++e g++r++k+Ckek+en+ k++k++keg+++++ + +t+++fdql+ OIW06249 73 RWPRQETLALLKIRSDMDVAFRDASVKGPLWEEISRKLAELGYHRNAKKCKEKFENVYKYHKRTKEGRSGKS--DGKTYKFFDQLQ 156 8******************************************************************964..5557****98 PP
2	trihelix	104.1	1e-32	499	584	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k evlaLi++r++++ +++++ k+plWee+s+ m+ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf++l+a OIW06249 499 RWPKVEVLALIRLRTSLDAKYQENGPKGPLWEEISSLMKNNGYNRSSKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHELDA 584 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 683 aa Download sequence
MLGDSAVLGA GGGGGGGGGG SSGDAVASAS AAAAAAVHEG GGDTAVGGGG GSISGDEERG 60 RGEEGDRSFG GNRWPRQETL ALLKIRSDMD VAFRDASVKG PLWEEISRKL AELGYHRNAK 120 KCKEKFENVY KYHKRTKEGR SGKSDGKTYK FFDQLQALEV VNHPAITIHQ SSTPSKPTQT 180 TAPLQVTPVS IVVTAASLPH TIPTTTTFPM VPSSNSITPS SVNVPFSHAT LPISMPQPIL 240 NTTTIATTPS INLTIPSFPP PTNPTYIPPS STPNPTTKPP PHVTNINPIS FPSIPMDLLS 300 NYSSSSTSSD ETLEGRRKRK RKWKDFFERL MKEMIEKQEE LQWRFLEAIE KREQERYSRE 360 EAWRMQEMQR INREREILAQ ERSMTASKDA AVMAFLQKLA EQQNLGQAFN NINIPQQHVP 420 PVATGSLLVP APAPAPIQVQ QQQILFPQAA SVPMPAVQAQ MQPAGAVVSV APQQQQQVSN 480 MEIVKADNGE NVTGTSSSRW PKVEVLALIR LRTSLDAKYQ ENGPKGPLWE EISSLMKNNG 540 YNRSSKRCKE KWENINKYFK KVKESNKKRP EDSKTCPYFH ELDALYRERN KLQNPMKHES 600 MMAPLMVQPE QQWPPQQPPT APPPNVTMED AQNDPMDHQN HEEEEEDEDD KDMDDEDEDE 660 DEGGGDNYEI VASKPSSVSA SAE

Sequence ? help Back to Top

Protein Sequence Length: 683 aa Download sequence

MLGDSAVLGA GGGGGGGGGG SSGDAVASAS AAAAAAVHEG GGDTAVGGGG GSISGDEERG  60
RGEEGDRSFG GNRWPRQETL ALLKIRSDMD VAFRDASVKG PLWEEISRKL AELGYHRNAK  120
KCKEKFENVY KYHKRTKEGR SGKSDGKTYK FFDQLQALEV VNHPAITIHQ SSTPSKPTQT  180
TAPLQVTPVS IVVTAASLPH TIPTTTTFPM VPSSNSITPS SVNVPFSHAT LPISMPQPIL  240
NTTTIATTPS INLTIPSFPP PTNPTYIPPS STPNPTTKPP PHVTNINPIS FPSIPMDLLS  300
NYSSSSTSSD ETLEGRRKRK RKWKDFFERL MKEMIEKQEE LQWRFLEAIE KREQERYSRE  360
EAWRMQEMQR INREREILAQ ERSMTASKDA AVMAFLQKLA EQQNLGQAFN NINIPQQHVP  420
PVATGSLLVP APAPAPIQVQ QQQILFPQAA SVPMPAVQAQ MQPAGAVVSV APQQQQQVSN  480
MEIVKADNGE NVTGTSSSRW PKVEVLALIR LRTSLDAKYQ ENGPKGPLWE EISSLMKNNG  540
YNRSSKRCKE KWENINKYFK KVKESNKKRP EDSKTCPYFH ELDALYRERN KLQNPMKHES  600
MMAPLMVQPE QQWPPQQPPT APPPNVTMED AQNDPMDHQN HEEEEEDEDD KDMDDEDEDE  660
DEGGGDNYEI VASKPSSVSA SAE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	316	321	RRKRKR
2	316	322	RRKRKRK
3	317	322	RKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76890.2	4e-67	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW06249