PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW04770

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MIKC_MADS

Protein Properties

Length: 357aa MW: 40620.7 Da PI: 8.1463

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW04770	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	62.3	5.4e-20	10	53	2	45
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45 + en+ rq t++kR+ngi+KKA+ELS+LCd+++ +++fs++gk OIW04770 10 KLENTNGRQATYAKRKNGIIKKASELSILCDVDIILLMFSPSGK 53 6799**************************************97 PP
2	K-box	21.8	8.1e-09	145	185	47	87
K-box 47 slkeLqqLeqqLekslkkiRskKnellleqieelqkkekel 87 ++++L+q+e+ L++sl++iR++K+++ ++q+ lq ++ + OIW04770 145 NVEQLEQMENSLKESLNQIRNRKENMQKQQLVSLQCNNQFN 185 6899**************************99999776655 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MGRVKLKIKK LENTNGRQAT YAKRKNGIIK KASELSILCD VDIILLMFSP SGKPSLCRGR 60 RSNFEEVITK FAQMTPHERA KRKLESLEAL KKTFKKLDHD VNVQEFLGTS SQTIEVNHLY 120 CFPHLFIKCL SYTNSQWTDI GKISNVEQLE QMENSLKESL NQIRNRKENM QKQQLVSLQC 180 NNQFNEMHNP FRMSGDQHLQ SLSWIANGDS QNMVLPEDSK LFLHRDVEGS ASSSFGSYAS 240 YLGSSTKTDI SNSGQENGVL SDLSSTAPAR LQLNGKFQYQ PYNFNLLNDM KLQPAAEMNP 300 HENNVDYHVN ASFEPPRPSY DSNHHNWNST SGPCAVTMFE EYLFGQASFP QVHFGFT

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MGRVKLKIKK LENTNGRQAT YAKRKNGIIK KASELSILCD VDIILLMFSP SGKPSLCRGR  60
RSNFEEVITK FAQMTPHERA KRKLESLEAL KKTFKKLDHD VNVQEFLGTS SQTIEVNHLY  120
CFPHLFIKCL SYTNSQWTDI GKISNVEQLE QMENSLKESL NQIRNRKENM QKQQLVSLQC  180
NNQFNEMHNP FRMSGDQHLQ SLSWIANGDS QNMVLPEDSK LFLHRDVEGS ASSSFGSYAS  240
YLGSSTKTDI SNSGQENGVL SDLSSTAPAR LQLNGKFQYQ PYNFNLLNDM KLQPAAEMNP  300
HENNVDYHVN ASFEPPRPSY DSNHHNWNST SGPCAVTMFE EYLFGQASFP QVHFGFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03060.2	4e-81	M-type_MADS family protein

Link Out ? help Back to Top
Ensembl	OIW04770