PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW04536

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 366aa MW: 40191 Da PI: 10.048

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW04536	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	48.8	1.9e-15	72	159	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspk...qCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +Liea e+ +l+rg+lk+++W+ev++ + ++ ++++pk qCk++++ ++k+yk +k+ + ++ s++p++++l+ OIW04536 72 CWSEGGTAVLIEAWGERYLELSRGNLKQKHWKEVAEIVsGREDYTKTPKtdiQCKNRIDTVKKKYKSEKAKIAAG--GAPSKWPFYERLD 159 7***********************************856666666543339**************9997..67778****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MDDDDEIQSH PSPASGSPVS SPTENGRITV TVAAPAPHQV PPMNSLALAL PIQTQARGSN 60 GGGGGGGGRE DCWSEGGTAV LIEAWGERYL ELSRGNLKQK HWKEVAEIVS GREDYTKTPK 120 TDIQCKNRID TVKKKYKSEK AKIAAGGAPS KWPFYERLDR LIGPTAKIPG SAAGASNLQP 180 QKVPVAIPVG IRSANQYQPR QQQLPLKNQK IQIRRRPPAE ESDSSERDVP SPVSSDSYPP 240 ESYERKKPKI QTETNSIAVK GREKEKGKGW GSAVKELTQA ILKFGEAYEQ AESSKLQQVV 300 EMEKQRMKFA KDLEVQRMQF FMKTQLEISQ LNKTKKKGGN GNGNGSNNHH SNNNNMNNHN 360 NNSVSE

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MDDDDEIQSH PSPASGSPVS SPTENGRITV TVAAPAPHQV PPMNSLALAL PIQTQARGSN  60
GGGGGGGGRE DCWSEGGTAV LIEAWGERYL ELSRGNLKQK HWKEVAEIVS GREDYTKTPK  120
TDIQCKNRID TVKKKYKSEK AKIAAGGAPS KWPFYERLDR LIGPTAKIPG SAAGASNLQP  180
QKVPVAIPVG IRSANQYQPR QQQLPLKNQK IQIRRRPPAE ESDSSERDVP SPVSSDSYPP  240
ESYERKKPKI QTETNSIAVK GREKEKGKGW GSAVKELTQA ILKFGEAYEQ AESSKLQQVV  300
EMEKQRMKFA KDLEVQRMQF FMKTQLEISQ LNKTKKKGGN GNGNGSNNHH SNNNNMNNHN  360
NNSVSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14180.1	4e-60	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW04536