PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW03924

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HD-ZIP

Protein Properties

Length: 846aa MW: 92818.8 Da PI: 6.275

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW03924	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.1	3.1e-18	27	85	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 k ++t+eq+e+Le+++ k+++ps +r++L +++ +++ +q+kvWFqNrR +ek+ OIW03924 27 KYVRYTAEQVEALERVYTKCPKPSSMRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 85 56789****************************************************97 PP
2	bZIP_1	21.2	6.5e-07	79	124	18	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 18 rrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 rr+R++ ++e +L++ +L+a Nk L +e+++l+k+v++l se+ OIW03924 79 RRCREKQRKEASQLQTVNRKLSAMNKLLMEENNRLQKQVSQLVSEN 124 9*****************************************9987 PP
3	START	161.6	5.9e-51	166	373	2	204
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXXTT CS START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvaelqa 100 +aee+++e+++ka+ ++ Wv+++ +++g+e++ +f+ s++++g a+ra+g+v +++ v+e+l+d++ W + +++ e+ ++ g g+++l +++++a OIW03924 166 IAEETLAEFLSKATGTAVDWVQMPGMKPGPESVGIFAISESCTGVAARACGLVSLEPT-KVAEILKDRPSWFRECRSLEVFTTVPAGngGTIELVYTQTYA 265 7899****************************************************.8888888888************9999******** PP XX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHH CS START 101 lsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwv 197 +++l+p Rdf+++Ry+ +lg g +v++++S++ p+ s++vRae+l Sg+li+p+++g+s +++v+h +l+++++++++r+l++s + ++k++ OIW03924 266 PTTLAPaRDFWTLRYTTTLGNGNLVVCERSLSGSGAGPNaaaASQFVRAEVLSSGCLIRPCEGGGSIIHIVDHLNLQAWSVPEVMRPLYESAKMVAQKMTI 366 ****************************99999999999****************************************************** PP HHTXXXX CS START 198 atlqrqc 204 a+l++ + OIW03924 367 AALRYIR 373 99865 PP

Sequence ? help Back to Top
Protein Sequence Length: 846 aa Download sequence
MAMAMTQQRE SNSSGGSSID KHLDSGKYVR YTAEQVEALE RVYTKCPKPS SMRRQQLIRE 60 CPILSNIEPK QIKVWFQNRR CREKQRKEAS QLQTVNRKLS AMNKLLMEEN NRLQKQVSQL 120 VSENGYMRQQ LHTPSARATD GSCDSAVTTP QHSMRDANDP AGFLSIAEET LAEFLSKATG 180 TAVDWVQMPG MKPGPESVGI FAISESCTGV AARACGLVSL EPTKVAEILK DRPSWFRECR 240 SLEVFTTVPA GNGGTIELVY TQTYAPTTLA PARDFWTLRY TTTLGNGNLV VCERSLSGSG 300 AGPNAAAASQ FVRAEVLSSG CLIRPCEGGG SIIHIVDHLN LQAWSVPEVM RPLYESAKMV 360 AQKMTIAALR YIRQIAQETS GEVVYALGRQ PAVLRTFSQR LSRGFNNAVN GFNDDGWSVL 420 NCDGVEDVII AVNSTMNSNG TSNPASSLTF FGGILCAKAS MLLQNVPPSV LIRFLREHRS 480 EWADFNVDAY SAAALKADSY AYPGMRPIKF TGNQIIMPLG HTIEHEEMLE VIRLEGHSLA 540 QEDAFVSRDI HLLQICSGID ENAVGLCSEL IFAPINEMFP DDAPLVPSGF RIIPLDSKPG 600 DKKDVTTANQ TLNLTSGLDV GPSANNAAGD ASSCYSNRSV LTIAFQFPFD SSLQDNIALM 660 AIQYVRSVIS SVQRIAMAIS PSGINPAIDA KSSPGSPEAL TLAHWICQSY SYHLGMELLR 720 FDALVGESML KHLWHHQDAI LCCSLKSLPV FVFANQAGLD MMETTLVALQ DITLDKIFDE 780 SGRKTFFADF AKLMQQGFTY LPSGICMSTM GRHVSYEQAI AWKVYAEGDY NNVHCLALSF 840 INWSFV

Sequence ? help Back to Top

Protein Sequence Length: 846 aa Download sequence

MAMAMTQQRE SNSSGGSSID KHLDSGKYVR YTAEQVEALE RVYTKCPKPS SMRRQQLIRE  60
CPILSNIEPK QIKVWFQNRR CREKQRKEAS QLQTVNRKLS AMNKLLMEEN NRLQKQVSQL  120
VSENGYMRQQ LHTPSARATD GSCDSAVTTP QHSMRDANDP AGFLSIAEET LAEFLSKATG  180
TAVDWVQMPG MKPGPESVGI FAISESCTGV AARACGLVSL EPTKVAEILK DRPSWFRECR  240
SLEVFTTVPA GNGGTIELVY TQTYAPTTLA PARDFWTLRY TTTLGNGNLV VCERSLSGSG  300
AGPNAAAASQ FVRAEVLSSG CLIRPCEGGG SIIHIVDHLN LQAWSVPEVM RPLYESAKMV  360
AQKMTIAALR YIRQIAQETS GEVVYALGRQ PAVLRTFSQR LSRGFNNAVN GFNDDGWSVL  420
NCDGVEDVII AVNSTMNSNG TSNPASSLTF FGGILCAKAS MLLQNVPPSV LIRFLREHRS  480
EWADFNVDAY SAAALKADSY AYPGMRPIKF TGNQIIMPLG HTIEHEEMLE VIRLEGHSLA  540
QEDAFVSRDI HLLQICSGID ENAVGLCSEL IFAPINEMFP DDAPLVPSGF RIIPLDSKPG  600
DKKDVTTANQ TLNLTSGLDV GPSANNAAGD ASSCYSNRSV LTIAFQFPFD SSLQDNIALM  660
AIQYVRSVIS SVQRIAMAIS PSGINPAIDA KSSPGSPEAL TLAHWICQSY SYHLGMELLR  720
FDALVGESML KHLWHHQDAI LCCSLKSLPV FVFANQAGLD MMETTLVALQ DITLDKIFDE  780
SGRKTFFADF AKLMQQGFTY LPSGICMSTM GRHVSYEQAI AWKVYAEGDY NNVHCLALSF  840
INWSFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60690.1	0.0	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	OIW03924