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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW03827 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | Trihelix | ||||||||
| Protein Properties | Length: 318aa MW: 36531.2 Da PI: 5.7157 | ||||||||
| Description | Trihelix family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | trihelix | 48.8 | 1.8e-15 | 90 | 174 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
W+++e+ +L+++ ++ + +r++l+ W+ev++k+ + +er+ +qC+++++ l+k+ykk+k + t++ ss+++yf++++
OIW03827 90 WSEHETFVLLAVWGDRFLQHGRKSLRSEEWQEVAEKVsKVSSVERTDTQCRNRLDTLKKKYKKEKIKFPE-TDGGSSNWVYFKRMD 174
*************************************555678**********************99998.699999********8 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 318 aa Download sequence |
MDDIEDDDTR YPSNPYRVSH HHQGYDYMSR QKLLMNVSPY SKPVKNGYGE DNSNNEGEAY 60 EFAPHVPSPS AVAPSALKPS FGGRNPLTDW SEHETFVLLA VWGDRFLQHG RKSLRSEEWQ 120 EVAEKVSKVS SVERTDTQCR NRLDTLKKKY KKEKIKFPET DGGSSNWVYF KRMDKLMSSP 180 PQVDPSCGLD SGEYVSTNSR IYSNRANGLD EMRDSLGNTE STEEASDGPH AKKRRRGRGS 240 GEASSYRLLA DSLHRFSNIY EKIENDRRQQ MVELEKMRVD IQKEIETQRR EILERLQSEI 300 SKLEQTDEEN DGSSENGM |
| Nucleic Localization Signal ? help Back to Top | |||
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| No. | Start | End | Sequence |
| 1 | 231 | 237 | AKKRRRG |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G24490.1 | 2e-53 | Trihelix family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW03827 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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