PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW03777

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 519aa MW: 57588.7 Da PI: 8.2203

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW03777	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.2e-05	92	114	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H OIW03777 92 FICEICNKGFQRDQNLQLHRRGH 114 89*******************88 PP
2	zf-C2H2	12.1	0.00061	169	191	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ OIW03777 169 WKCDKCSKKYAVQSDWKAHSKTC 191 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MMDGLMFQQQ LLVEENMSNL TSASGEASAS SGTRTEIGNS SNYSQQQPYL APPQSSQAQP 60 QAKRKRNLPG NPDPDSEVIA LSPKTLMATN RFICEICNKG FQRDQNLQLH RRGHNLPWKL 120 KQRTNKDIIR KKVYVCPEPS CVHHDPSRAL GDLTGIKKHF SRKHGEKKWK CDKCSKKYAV 180 QSDWKAHSKT CGTREYRCDC GTLFSRRDSF ITHRAFCDAL AEESAREGIP NQHHSSLLQP 240 SHHINLQTHD QDNNIHATNN IFPLKKEQQS FSLISPQIMP QWLGPQSHNN NNNPLHLSST 300 SSIFSHDQQH HHQDLSNLHE TQNPNPSSLG PTHLLPAVPV SSPNMSATAL LQKAAQMGAT 360 MSKLCSSQSQ PIMRPHMQPH VTSSTNGNNN NNNNNDNISN SGSNNNFGLN LSSHQDHVTT 420 TTTNTASVSQ SSFLHHVMFE GTSFEDAFGG ILNSNKDDAI IPKTNNGDDG GGNEAMTRDF 480 LSLRPLSHSD FFTIAGIGNC MNSSTSHDQQ NQSQKPWQG

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MMDGLMFQQQ LLVEENMSNL TSASGEASAS SGTRTEIGNS SNYSQQQPYL APPQSSQAQP  60
QAKRKRNLPG NPDPDSEVIA LSPKTLMATN RFICEICNKG FQRDQNLQLH RRGHNLPWKL  120
KQRTNKDIIR KKVYVCPEPS CVHHDPSRAL GDLTGIKKHF SRKHGEKKWK CDKCSKKYAV  180
QSDWKAHSKT CGTREYRCDC GTLFSRRDSF ITHRAFCDAL AEESAREGIP NQHHSSLLQP  240
SHHINLQTHD QDNNIHATNN IFPLKKEQQS FSLISPQIMP QWLGPQSHNN NNNPLHLSST  300
SSIFSHDQQH HHQDLSNLHE TQNPNPSSLG PTHLLPAVPV SSPNMSATAL LQKAAQMGAT  360
MSKLCSSQSQ PIMRPHMQPH VTSSTNGNNN NNNNNDNISN SGSNNNFGLN LSSHQDHVTT  420
TTTNTASVSQ SSFLHHVMFE GTSFEDAFGG ILNSNKDDAI IPKTNNGDDG GGNEAMTRDF  480
LSLRPLSHSD FFTIAGIGNC MNSSTSHDQQ NQSQKPWQG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	119	132	KLKQRTNKDIIRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	1e-105	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW03777