PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW03668

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 352aa MW: 41191.1 Da PI: 4.474

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW03668	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	48.9	1.7e-15	122	206	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++ + +L+e+ ++ +l+r++l+ +W +v++k+ +e ++er+ qC++ +++l++rykk+k++ + + ++s+++yf++++ OIW03668 122 WTEHATFVLLEVWGDKFLQLGRNSLRSDDWNDVAEKVsEELKVERNVFQCRNMLDKLKRRYKKEKARIDEM-CLNTSKWAYFKKMD 206 ***********************************8889************************96.***********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MDDMEDDARY PPKSFSLNRQ NPSHRQKHPI RGTPYHHHRP IPTRYVEEPD EDEEPEEFDN 60 YDAGEDEFDQ EENGYGGNFE NDDGFGRNSN KKRKVRGGPS VSNYELAPHM KTSYNRSSED 120 DWTEHATFVL LEVWGDKFLQ LGRNSLRSDD WNDVAEKVSE ELKVERNVFQ CRNMLDKLKR 180 RYKKEKARID EMCLNTSKWA YFKKMDMLMA SSARQEYGLA CGVDSGEYVF MNTRVYLNKS 240 NGFDEMRDSP GESETDEDND DSKTAVKVGG DEDDETSYRV LADSIQKFGK IYEKIESSKR 300 EQMMELEKMR LDFNRELELQ KKQILERAQA EIAKIQEVDE DDTETSTENL SE

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MDDMEDDARY PPKSFSLNRQ NPSHRQKHPI RGTPYHHHRP IPTRYVEEPD EDEEPEEFDN  60
YDAGEDEFDQ EENGYGGNFE NDDGFGRNSN KKRKVRGGPS VSNYELAPHM KTSYNRSSED  120
DWTEHATFVL LEVWGDKFLQ LGRNSLRSDD WNDVAEKVSE ELKVERNVFQ CRNMLDKLKR  180
RYKKEKARID EMCLNTSKWA YFKKMDMLMA SSARQEYGLA CGVDSGEYVF MNTRVYLNKS  240
NGFDEMRDSP GESETDEDND DSKTAVKVGG DEDDETSYRV LADSIQKFGK IYEKIESSKR  300
EQMMELEKMR LDFNRELELQ KKQILERAQA EIAKIQEVDE DDTETSTENL SE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	176	181	DKLKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	1e-98	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW03668