PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW02780

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

FAR1

Protein Properties

Length: 934aa MW: 104650 Da PI: 7.6047

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW02780	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	41.8	3.6e-13	62	136	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 f neYA++vGF + + +sk +g + r+fvC eg +++ +++ C+a+++++++ ++kw vtk+ +eH+H+++ OIW02780 62 FCNEYARRVGFVSKAGPHGRSKADGANMYREFVCGGEGLKKRLTES--------------CDAMIRIEQKGQSKWFVTKFLKEHSHSMS 136 789**********************************9987766..............************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 934 aa Download sequence
MDVQVINLGE GSGRQAMIGD GDAEPREGEI NNAENSGSHV EVGISEPYLG MSFDSEDAAK 60 TFCNEYARRV GFVSKAGPHG RSKADGANMY REFVCGGEGL KKRLTESCDA MIRIEQKGQS 120 KWFVTKFLKE HSHSMSGSTK VHNNRPRKHF SSVGRTMPET YQGLGLVPSG VMYSMDGNRN 180 SNENLHGIRN IPAAAALVET GHPVKNPTGA IYVSTDTNRN SNESLHGIKN ISAAAAAVET 240 SHHVKNSTLM NCTVRPHVRK RTLGRDAQNL LEYFKKMQAA NPGFFYAIQL DEDNHMTNVF 300 WADARSRTAY SHFGDMVNLD TTYRVYQYRV PFAPFTGINH HGQRILFGCA LLLDDSEASL 360 LWLIKTFLTA MNDRHPVSIT TDQDRAIKIA VSQVLPHTRH CISKWHVLRE GQEKLAHVCH 420 MHPKFQAELY NCINLTETIE EFDSSWNSII DKYELGRNDW LQSLYNARAQ WVPAYFRDSF 480 FAAISPNQGL DGSFFDGFVN QQTTLPMFFR QYELALESCL EKEIESDAET ICTTPVLKTP 540 SPMEKQAADL YTRKIFSKFQ EELVETFVYT ANRIDEDGPN IKFRVAKFED DQKAYMVTIN 600 HSELRASCSC QMFEYSGILC RHVLTVFTVT NVLTLPSHYI LKRWTRNAKN SVGLEECGAE 660 SHGQESVASR YSNLCREAIR YAEEGAISVE TYKAAMNALR EGGKKVSVVK RSVAKVAPSS 720 YLAGGTAYDD KKTPASASNT TPLLWPRQDE ITRRFNLNDI GAPVQSVTDL NLPRMAPVSF 780 QRDDSPTENM VVIPCLKSMT WVMENKNSTP GNRVAVISMK LHDYCKNPST ESEVKFQLSR 840 VSLEPMLKSM AYISEQLSTP ANKVAVINLK LQDAETTSGQ SEVKFQVSRD TLGAMLRSMA 900 YIREQLSSAV IREQLSSVGV GDVQSEPILK KHRK

Sequence ? help Back to Top

Protein Sequence Length: 934 aa Download sequence

MDVQVINLGE GSGRQAMIGD GDAEPREGEI NNAENSGSHV EVGISEPYLG MSFDSEDAAK  60
TFCNEYARRV GFVSKAGPHG RSKADGANMY REFVCGGEGL KKRLTESCDA MIRIEQKGQS  120
KWFVTKFLKE HSHSMSGSTK VHNNRPRKHF SSVGRTMPET YQGLGLVPSG VMYSMDGNRN  180
SNENLHGIRN IPAAAALVET GHPVKNPTGA IYVSTDTNRN SNESLHGIKN ISAAAAAVET  240
SHHVKNSTLM NCTVRPHVRK RTLGRDAQNL LEYFKKMQAA NPGFFYAIQL DEDNHMTNVF  300
WADARSRTAY SHFGDMVNLD TTYRVYQYRV PFAPFTGINH HGQRILFGCA LLLDDSEASL  360
LWLIKTFLTA MNDRHPVSIT TDQDRAIKIA VSQVLPHTRH CISKWHVLRE GQEKLAHVCH  420
MHPKFQAELY NCINLTETIE EFDSSWNSII DKYELGRNDW LQSLYNARAQ WVPAYFRDSF  480
FAAISPNQGL DGSFFDGFVN QQTTLPMFFR QYELALESCL EKEIESDAET ICTTPVLKTP  540
SPMEKQAADL YTRKIFSKFQ EELVETFVYT ANRIDEDGPN IKFRVAKFED DQKAYMVTIN  600
HSELRASCSC QMFEYSGILC RHVLTVFTVT NVLTLPSHYI LKRWTRNAKN SVGLEECGAE  660
SHGQESVASR YSNLCREAIR YAEEGAISVE TYKAAMNALR EGGKKVSVVK RSVAKVAPSS  720
YLAGGTAYDD KKTPASASNT TPLLWPRQDE ITRRFNLNDI GAPVQSVTDL NLPRMAPVSF  780
QRDDSPTENM VVIPCLKSMT WVMENKNSTP GNRVAVISMK LHDYCKNPST ESEVKFQLSR  840
VSLEPMLKSM AYISEQLSTP ANKVAVINLK LQDAETTSGQ SEVKFQVSRD TLGAMLRSMA  900
YIREQLSSAV IREQLSSVGV GDVQSEPILK KHRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein

Link Out ? help Back to Top
Ensembl	OIW02780