PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW02640

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

G2-like

Protein Properties

Length: 470aa MW: 53827 Da PI: 5.4048

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW02640	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.7	4.7e-32	249	302	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ OIW02640 249 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 302 9****************************************************7 PP
2	Myb_DNA-binding	46.4	9.2e-15	250	301	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ OIW02640 250 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 301 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MPTTAAPDLS LHISLPSTSA SCNNTTATTL PNNYEDLTTI TVSQAHTELS LGRDFTPTQE 60 TQQNPYYQSQ THDFHHLHHN HYKNSTSYAT STSNTAAATN NTTPMNHTNY DLPLDGLRPI 120 KGIPVYHNRS FPFMPLDHSR DHHKDLLHQQ HQHNMCLYHH VPSYPSLSSS CSSSSPYFAA 180 ASLDPMSLRA AATAATRFNG MCGADAFNSL PSLHHHHSQF GVNTSDTSPG LIRSKFLPKL 240 PIRRSMRAPR MRWTSTLHAR FVHAVELLGG HERATPKSVL ELMDVKDLTL AHVKSHLQMY 300 RTVKTTDKPA VSLGHSNGSG EDDMSPIGSS VDRDGLSQFT DQRGWPDQPV QQDMDYTSTI 360 ATLWSNSSRY TINSAFSYCM EEEENEDEDE EEEEQEDEQE DEDEEEKEEE EEEEEEEDQD 420 EVEDDDDDDE DEDEDCMMMR KRKRRRKRKR NRMRMRMRMR IRLRIGRGRR

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MPTTAAPDLS LHISLPSTSA SCNNTTATTL PNNYEDLTTI TVSQAHTELS LGRDFTPTQE  60
TQQNPYYQSQ THDFHHLHHN HYKNSTSYAT STSNTAAATN NTTPMNHTNY DLPLDGLRPI  120
KGIPVYHNRS FPFMPLDHSR DHHKDLLHQQ HQHNMCLYHH VPSYPSLSSS CSSSSPYFAA  180
ASLDPMSLRA AATAATRFNG MCGADAFNSL PSLHHHHSQF GVNTSDTSPG LIRSKFLPKL  240
PIRRSMRAPR MRWTSTLHAR FVHAVELLGG HERATPKSVL ELMDVKDLTL AHVKSHLQMY  300
RTVKTTDKPA VSLGHSNGSG EDDMSPIGSS VDRDGLSQFT DQRGWPDQPV QQDMDYTSTI  360
ATLWSNSSRY TINSAFSYCM EEEENEDEDE EEEEQEDEQE DEDEEEKEEE EEEEEEEDQD  420
EVEDDDDDDE DEDEDCMMMR KRKRRRKRKR NRMRMRMRMR IRLRIGRGRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	439	446	MRKRKRRR
2	440	445	RKRKRR
3	440	446	RKRKRRR
4	440	448	RKRKRRRKR
5	440	450	RKRKRRRKRKR
6	441	446	KRKRRR
7	441	447	RKRKRRR
8	441	449	RKRKRRRKR
9	442	448	RKRKRRR
10	442	450	RKRKRRRKR
11	442	452	RKRKRRRKRKR
12	442	446	RKRRR
13	443	449	RKRKRRR
14	444	450	RKRKRRR
15	444	454	RKRKRRRKRKR
16	445	450	RRKRKR
17	446	456	RKRKRRRKRKR
18	448	458	RKRKRRRKRKR
19	448	454	RKRNRMR
20	449	454	KRNRMR
21	450	460	RKRKRRRKRKR
22	452	462	RKRKRRRKRKR
23	454	464	RKRKRRRKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	1e-54	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIW02640