PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW02538
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family GATA
Protein Properties Length: 282aa    MW: 30730.8 Da    PI: 6.5002
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW02538genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.11.8e-16213248134
      GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
               C++Cg ++  Tp++Rrgp+g+++LCnaCGl+++++ 
  OIW02538 213 CTHCGISSksTPMMRRGPNGPRSLCNACGLFWASRQ 248
               *****99999**********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MNMSNQNGAA ENGDASGQLS IDHIQYETHD LEDGNGGIGS CVIEEVNSDG VYVSGDGGGG  60
DHDFSLQPCD GSSQLTLAFR GQVYVFDSVT PDKVQSVLLL LGGRESPCPD TAPQHDQRVF  120
SDNGRTMVLQ QGPMEYPARC SQLQRAASLS RFRQKKNKRC FDKIVRYDVR QEVALRMHRN  180
KGQFTSSKKQ DGANSWGTDQ ESGQDDSPHE TACTHCGISS KSTPMMRRGP NGPRSLCNAC  240
GLFWASRQVG KGNYSDYGTA IRAHSNVVAF SVKDNPDLVS DR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.24e-73GATA family protein