PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW02201

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MIKC_MADS

Protein Properties

Length: 209aa MW: 24505.9 Da PI: 8.5751

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW02201	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.2	1.6e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELS+LCdaeva+iifs++gklye++s OIW02201 9 KRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP
2	K-box	82.5	9.6e-28	90	172	5	87
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekel 87 + ++ + ++++ +qe+ kLk+++e+Lqr+qR++lGe+Le L++keL+qLe+qL++slk+iRs K++++l+q+ +l+ k +e+ OIW02201 90 EVHNQPAMETQKRYQEYLKLKSKVEELQRTQRNFLGEELEHLDIKELEQLERQLDSSLKQIRSNKTQHMLDQLADLKTKWEEI 172 5555777899********************************************************************98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MGRGKVVLKR IENKINRQVT FAKRRNGLLK KAYELSILCD AEVALIIFSN RGKLYEFCSS 60 SSTYTSVLTI DFSMGKTLER YHRCSYESLE VHNQPAMETQ KRYQEYLKLK SKVEELQRTQ 120 RNFLGEELEH LDIKELEQLE RQLDSSLKQI RSNKTQHMLD QLADLKTKWE EINIALQPTW 180 EQNAPYNRHP PTSEGYYETA HCNSTLIIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15800.1	2e-84	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	OIW02201