PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW01908 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MYB_related | ||||||||
Protein Properties | Length: 275aa MW: 28080.9 Da PI: 10.816 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.2 | 4.5e-09 | 9 | 46 | 10 | 47 |
HHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 10 ellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 el++ + +++G+g+W++I+r + +Rt+ q+ s+ qky OIW01908 9 ELFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKY 46 799999*******************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MIRIFFNLEL FLLGLEKYGK GDWRSISRNF VVTRTPTQVA SHAQKYFIRL NSMNKDRRRS 60 SIHDITSVNN GDVSASQAPI TGQTNGSAGN STGKSGKQAP PASTGVPSVG IYAAPTIGQP 120 IGGPLVSAVG TPVNLPAPGH MAYGVRAPVP GAPMNIVPMT YPMSQTSAPH SVNNGDVSAS 180 QAPITGQTNG SAGNSTGKSG KQAPPASTGV PSVGIYAAPT IGQPIGGPLV SAVGTPVNLP 240 APGHMAYGVR APVPGAPMNI VPMTYPMSQT SAPHR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 3e-54 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW01908 |