PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW01780

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 184aa MW: 20962 Da PI: 6.2361

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW01780	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00053	34	56	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C+ C + F++ L H++ H OIW01780 34 YDCTFCRRGFTNAQALGGHMNIH 56 88*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 184 aa Download sequence
MKSVIGGSSS ETSSEETDHQ KEDQYDSTSS KRSYDCTFCR RGFTNAQALG GHMNIHRKDK 60 AKAKQGTPNN LFTKEEYIMV PSFIPQTSTF CSMFESQRNY DIHFQPSSTP NYSRNPPAYA 120 FQYEFLNPTR YESLSTNYQE LLGPNLTLQI GPSHVSTDEV RKGIQNDGEV VDLELRLSHY 180 PYSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53820.1	2e-15	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW01780