PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIW01609 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 453aa MW: 51008.9 Da PI: 6.0159 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.2 | 1.6e-07 | 339 | 386 | 4 | 48 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E ++lvd++ ++G g+W+ I r + Rt+ +++++w+++l OIW01609 339 WTLPEVKKLVDGISEYGIGRWTNIKRFFFsssSYRTPTDIRDKWRNLL 386 ****************************99**99************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 453 aa Download sequence |
MYGKVQVDES YVPVLKDDEM EDEHLLEEHR NGHISMDGSL DSHTTLNGMD DLGLEVLVLS 60 MFGTSSYYWD DVEARVLDGI LDDVEINDLD GIDVFSGACD EYFLDCDFVN DPEVLGYGLS 120 KGSLLQNSSS ESHSSGFSGS SIVGGVSEST KVPSAQPECK NYSPDGTTTS ESSDALRNNP 180 SQPSNGDCMY IISLDMKHLH ELNNDHPLAG GILSFENEKD AAEEPQPTAL REKRFRKPTK 240 RYIEESSNLR SKEKVPTAAT KNKNLSLSSC DELNVRPKAL GKIPDEKYRN ENSDVTLSAL 300 KVCRGHPKKK KLENDKEPLS SESEDEPKRK DRRKSQKMWT LPEVKKLVDG ISEYGIGRWT 360 NIKRFFFSSS SYRTPTDIRD KWRNLLRASS AQKSYDKEAE QNDELALRPL PLDVVHRVRE 420 LAKIHPYPRA RGSKKSCVRS SLGKRNFQRK RCS |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 308 | 334 | KKKKLENDKEPLSSESEDEPKRKDRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G72650.1 | 5e-22 | MYB_related family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIW01609 |