PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW01034

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 311aa MW: 36349.9 Da PI: 6.4223

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW01034	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	55.2	1.8e-17	27	117	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt+qe+l Li+a++e++ +l+rg l+ +Weev+ ++ ++s++qC++k+e+l++r++++k++ ++ ++ + + yf ++ OIW01034 27 WTHQETLNLIRAYQEKWYALKRGPLRSSQWEEVAVVVaarcgyDFNHPSKSAIQCRHKMEKLRQRHRAEKHRLLGGGLQQPRGWLYFGLMD 117 ***********************************8555543334479********************9999888888999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MATPSSPKPT PLNDTVSPTK KPQPIPWTHQ ETLNLIRAYQ EKWYALKRGP LRSSQWEEVA 60 VVVAARCGYD FNHPSKSAIQ CRHKMEKLRQ RHRAEKHRLL GGGLQQPRGW LYFGLMDELE 120 RGPMPISARP LTALSPPRNY DDDDNDSDND NKEDNYFADD DDKMMSYVKS KSINYILNER 180 PRTTKKYGVD LGFSREHVVP KGFRRMDYND ENYDDDDDDS DDENNEDEEK RVVANKEGLI 240 LGLTEEIKDF GERFIAMENL KMRMMKDTER YRVEMENKRI EMILKSQQRI VDSIGRAFGL 300 SNKKMKIVHE I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24860.1	8e-39	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW01034