PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW00349

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

E2F/DP

Protein Properties

Length: 603aa MW: 68869.1 Da PI: 9.9397

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW00349	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	75.4	5.8e-24	379	459	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL lltq+f+kl+ +s+ + ++l+++ak L+ + +++k+RR+YDi+NVL+++nliek ++k+++rw g OIW00349 379 RREKSLALLTQNFVKLFICSNMELISLDDAAKLLLGDahnssIMRTKVRRLYDIANVLSSMNLIEKthtadTRKPAFRWLG 459 689************************************999**********************99*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 603 aa Download sequence
MEEEKAAAYY EELTRKGEGA ARFKQGLGFS NSSSNDVVPK PGSALASSSS SFLSQFVKAS 60 NLSNPSESDK QAQIQSIQSK LKKKPSSESR VSERTRECDR NRRRSRSRER FRERSNESRK 120 RSRSRDGERY RHRDRRRRRS RSRSESDSDR ERRRRERDRG RRRSRSFSPR RLEKNRSDRG 180 KVSEGGKRKN AVVDYAKLID GYEKMSSSER VKAKMKLQLS ETAAQDSEKG VGWERFEFNK 240 DAPLDDEEVE VAEDDASLVK HIGQSFRFSA VKAKREEQIQ AAHDEAIFGA STLPPSIGID 300 SEPEIENEKE VDKKDLVTSL LSETEEALRE RLEGSQGVND NAKVWDDEDD DETLSNSGSQ 360 NDKSIPNSDA PKLQKNDNRR EKSLALLTQN FVKLFICSNM ELISLDDAAK LLLGDAHNSS 420 IMRTKVRRLY DIANVLSSMN LIEKTHTADT RKPAFRWLGL KENQNSNLNN SRKRAFGTDI 480 TNIDFKRNKV DVFTDGEFSH NPREQKELEH VSGINQVDKS NLKQCTKQSS SSYQFGPFAP 540 ANVHKVGASE NNDVKQVNDW ESLATVHRPN YQNEGLKELF SHYMEAWKSW NSEVAGKKPV 600 QNL

Sequence ? help Back to Top

Protein Sequence Length: 603 aa Download sequence

MEEEKAAAYY EELTRKGEGA ARFKQGLGFS NSSSNDVVPK PGSALASSSS SFLSQFVKAS  60
NLSNPSESDK QAQIQSIQSK LKKKPSSESR VSERTRECDR NRRRSRSRER FRERSNESRK  120
RSRSRDGERY RHRDRRRRRS RSRSESDSDR ERRRRERDRG RRRSRSFSPR RLEKNRSDRG  180
KVSEGGKRKN AVVDYAKLID GYEKMSSSER VKAKMKLQLS ETAAQDSEKG VGWERFEFNK  240
DAPLDDEEVE VAEDDASLVK HIGQSFRFSA VKAKREEQIQ AAHDEAIFGA STLPPSIGID  300
SEPEIENEKE VDKKDLVTSL LSETEEALRE RLEGSQGVND NAKVWDDEDD DETLSNSGSQ  360
NDKSIPNSDA PKLQKNDNRR EKSLALLTQN FVKLFICSNM ELISLDDAAK LLLGDAHNSS  420
IMRTKVRRLY DIANVLSSMN LIEKTHTADT RKPAFRWLGL KENQNSNLNN SRKRAFGTDI  480
TNIDFKRNKV DVFTDGEFSH NPREQKELEH VSGINQVDKS NLKQCTKQSS SSYQFGPFAP  540
ANVHKVGASE NNDVKQVNDW ESLATVHRPN YQNEGLKELF SHYMEAWKSW NSEVAGKKPV  600
QNL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	100	110	RNRRRSRSRER
2	102	112	RNRRRSRSRER
3	102	110	RRRSRSRER
4	104	114	RNRRRSRSRER
5	119	137	RKRSRSRDGERYRHRDRRR
6	119	139	RKRSRSRDGERYRHRDRRRRR
7	120	125	KRSRSR
8	129	139	RNRRRSRSRER
9	129	139	RYRHRDRRRRR
10	131	141	RHRDRRRRRSR
11	131	141	RNRRRSRSRER
12	133	143	RNRRRSRSRER
13	135	153	RKRSRSRDGERYRHRDRRR
14	135	155	RKRSRSRDGERYRHRDRRRRR
15	136	154	RKRSRSRDGERYRHRDRRR
16	136	156	RKRSRSRDGERYRHRDRRRRR
17	137	155	RKRSRSRDGERYRHRDRRR
18	137	157	RKRSRSRDGERYRHRDRRRRR
19	151	156	ERRRRE
20	153	163	RNRRRSRSRER
21	155	165	RNRRRSRSRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	3e-64	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	OIW00349