PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW00236
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family ARF
Protein Properties Length: 821aa    MW: 92118 Da    PI: 8.1639
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW00236genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.54.4e-17140222178
               EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT- CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegD 78 
               f k+lt sd++++g l++ k++a+e+       + ++++  +l+ +d++g++W++k+iyr+ ++r++l++GW+ Fv +++ + g+
  OIW00236 140 FYKTLTASDTSTHGGLSVLKRHADEClppldmtKDVPTQ--ELVTKDLHGNEWRFKHIYRGEPRRHLLQSGWSVFVTSKRCENGE 222
               789***************************987666555..8**************************************99987 PP
2Auxin_resp107.21.8e-35255337183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+haast+++F+v+Y+Pr+s+  F+v++ +++++lk++++ G Rfkm+fe+e+++e+r++Gt+vg++d+dp +Wp+SkWr+Lk
    OIW00236 255 AWHAASTRTMFTVYYKPRTSPVGFIVPYYQYMESLKINYTNGIRFKMRFEGEEAREQRFTGTIVGIEDVDPKKWPDSKWRNLK 337
                 89******************************************************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 821 aa     Download sequence    
MTSYSKIAMN KRGQFINNNT RDRGEGQNEA EQALFRELWE ACAGPLVTAP REGELVFYFP  60
QGHIEQVEAS TNQVPNENMP VYDLRSKILC RVMNVVLKVE PYTDEVFAQV TLVPEPIQDE  120
NKVEKEPPLA PLPRIHVRSF YKTLTASDTS THGGLSVLKR HADECLPPLD MTKDVPTQEL  180
VTKDLHGNEW RFKHIYRGEP RRHLLQSGWS VFVTSKRCEN GELRVGVRRA MRQQVNVPLS  240
IISSHSMYLG VLATAWHAAS TRTMFTVYYK PRTSPVGFIV PYYQYMESLK INYTNGIRFK  300
MRFEGEEARE QRFTGTIVGI EDVDPKKWPD SKWRNLKVRW DETSNIPLPD RVSPWMIEPY  360
LAPPSLNLIS IPRPKRHRPN VVPSSPESSV LTREGTSSKV TTNPFPASGY SRVLQGSEFS  420
TLRGNWVGSN TSDNGGKSIM WPPAVYDKKN DVVSTSRRFG PESWMSTRRH ETYSDLLSGF  480
GANRDLSSHI PSLLDQSGDV ANAAKKHLLD REGEHNVMGS PCSVVPSSLS LDLVNSNTKG  540
LAHGGDLPYQ VRGNFRYSAF SEYPVYGGQK VEHPHGNLMM LPPPTTQYVS PHSREMSSKQ  600
ISANTGEVVK PKEGNCKLFG FSLPSSPIVS GPSMSQRNVV NELVGPMHLP SHQNHTSEND  660
QKSEHSRGSK PTDGEFVADD YEKQSKDVQP KLHNSFARSY TKVHKKGIAL GRSVDLTKFG  720
GYDELIAELD QLFEFGGELT SPKKDWLIVY TDNEGDMMLV GDDPWLEFCA MVCKMYIYPK  780
EEIQKMNPGA LGSKNKENHS GSKGADAPAV KCQPPHPGYN T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein