PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW00233 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | Trihelix | ||||||||
Protein Properties | Length: 225aa MW: 25756.1 Da PI: 9.9103 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 64.5 | 2.3e-20 | 43 | 131 | 1 | 80 |
trihelix 1 rWtkqevlaLiearremeerlr...rgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 rWt+qe+l+Liea++ +e+ + k p+We vs+ ++++g++r+++qC+++w nl ++++kik++e++ ++e+++++p OIW00233 43 RWTRQETLVLIEAKKMVENGEQlfrF-KssygllnNSDPKWEIVSSCCQQQGVKRGSVQCRKRWGNLLTDFRKIKKWESSVKDEEKQQHP 131 8**************77776653322.1245555499*******************************************9888877776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MASNTEKNSE SSDSPIATPV AKQPTLEVVE TKSERIKATR HPRWTRQETL VLIEAKKMVE 60 NGEQLFRFKS SYGLLNNSDP KWEIVSSCCQ QQGVKRGSVQ CRKRWGNLLT DFRKIKKWES 120 SVKDEEKQQH PSCQGNYYPG CHREPMFQEG HKRKRSSPDN SEDATDFSNN IIKVLRRNTN 180 IMKAYLGAQN INQQLARDQQ KEQSDNLVAA LGKLTDAMTK IADKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 5e-26 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW00233 |