PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIV99950

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 522aa MW: 58963.9 Da PI: 5.5658

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV99950	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00046	159	175	1	17
EEETTTTEEESSHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLk 17 y CpdCgk+++ + L+ OIV99950 159 YICPDCGKRYNALDALR 175 89********9998885 PP

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence
MTDHYNKLVK LAARAFYDDL PPKGENQPKT GRSDNRGIAV VILDALTRRQ WVREEDFAKD 60 LKLHTKQLRR TLRFFEEEKI ITREYRRETA KGAKIYSAAV AATADGQTTK EGEEKVKLHT 120 HSYCCLDYAQ IYDVVRYRLH RMKHKLKDEL ENKNTVQEYI CPDCGKRYNA LDALRLLSFE 180 DEDFHCENCN GKLEIESDKI AAQEGGDGDD NARRRRRENL KDMLQKMEIQ LKPLLDQLSR 240 VKDLPVPEFG SLQSWEALAS AAGRAANGDN AGDSGNYQLG YNGAPMPYSG DTKVVVDFNG 300 TEVKGEGVKS EADGKAFKVL PPWMIRSGMV LTEEQRGEVK QESKMDGTST STKAPHTEDK 360 KSTVEHDSNT DIQGEYIKAY YAALLKQQAE AAKTEELANS HTTNDPSSSI SNRQVGMKTK 420 REEDVEEDDG TEWEEAPIGE LSVYANIEKS SSEFSLLSFN FFTPSHPDPP FFSPWIDNFT 480 LVGSFVVLNH MLAKPEPTRS EIDPRYGVEK RLVPTGPNPL HH

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence

MTDHYNKLVK LAARAFYDDL PPKGENQPKT GRSDNRGIAV VILDALTRRQ WVREEDFAKD  60
LKLHTKQLRR TLRFFEEEKI ITREYRRETA KGAKIYSAAV AATADGQTTK EGEEKVKLHT  120
HSYCCLDYAQ IYDVVRYRLH RMKHKLKDEL ENKNTVQEYI CPDCGKRYNA LDALRLLSFE  180
DEDFHCENCN GKLEIESDKI AAQEGGDGDD NARRRRRENL KDMLQKMEIQ LKPLLDQLSR  240
VKDLPVPEFG SLQSWEALAS AAGRAANGDN AGDSGNYQLG YNGAPMPYSG DTKVVVDFNG  300
TEVKGEGVKS EADGKAFKVL PPWMIRSGMV LTEEQRGEVK QESKMDGTST STKAPHTEDK  360
KSTVEHDSNT DIQGEYIKAY YAALLKQQAE AAKTEELANS HTTNDPSSSI SNRQVGMKTK  420
REEDVEEDDG TEWEEAPIGE LSVYANIEKS SSEFSLLSFN FFTPSHPDPP FFSPWIDNFT  480
LVGSFVVLNH MLAKPEPTRS EIDPRYGVEK RLVPTGPNPL HH

Link Out ? help Back to Top
Ensembl	OIV99950