PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIV99304

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 310aa MW: 34050 Da PI: 8.0666

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV99304	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.9	0.0015	133	153	1	21
EEETTTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHir 21 y+C+ C+++F++ L H OIV99304 133 YECKTCNRTFPSFQALGGHRA 153 99*********9888877765 PP
2	zf-C2H2	13.2	0.00027	222	244	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H OIV99304 222 HECSICGSEFTSGQALGGHMRRH 244 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MEKEQGLGRE ENLVVMAKGK RTKRLRLLSP DCGGATAATC THSSVNSEGS SSTTTYESTD 60 QEDQDMANCL ILLARGGGGN SHHHHDHLKK SHDHDGSGNN NKIEKGRSSG TSAGKFEEMA 120 TAINITKTDF FIYECKTCNR TFPSFQALGG HRAGHKKPKF VFPEEKKTLS QLQPQPQSHV 180 LTNNDNFEEA GKPHIKTTLP ISFQLENQAN RSIFNTNKAK IHECSICGSE FTSGQALGGH 240 MRRHRAATNT TTTQALAAVK AEVQHQRNIL ELDLNLPAPE EDLRESKFQF PATQKSIVLS 300 ASPALVDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	2e-47	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV99304