PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV99175

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 334aa MW: 37431.3 Da PI: 9.8059

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV99175	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	49.3	1.3e-15	30	130	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.............rergf.erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 +Wt++ + +Li+a e +l+rg+l++++W+ev++++ ++++ +r+ +qCk++++ l+k+yk +k++ ++ + + +s +p+f++l+a OIV99175 30 CWTEDATFTLIDAWGEHYLDLNRGNLRQKHWQEVADAVnnrhaaaagngnfNKKKCpRRTDVQCKNRIDTLKKKYKIEKARVSDSAGGYESPWPFFSRLDA 130 8************************************************66666477*********************9999999*****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MDSLIGAPSP TTPAPPRPPS STPFPVREDC WTEDATFTLI DAWGEHYLDL NRGNLRQKHW 60 QEVADAVNNR HAAAAGNGNF NKKKCPRRTD VQCKNRIDTL KKKYKIEKAR VSDSAGGYES 120 PWPFFSRLDA LIGDNFPIKK FSPPATSRRN SSAASKPPPP LPTPAWITSV PVGPRSGTQK 180 RPAALSPAIK DDFTFRRNFS AFAAAAAAAA EAESDDSDGL KSSTGTRGRV VREESEKEME 240 YGYRELANAI ERFGEIYERV ESVKQIQMVE LEKQRMQFAK DLEYQRMQLF METQLQLHKV 300 KRTKRSSGAS GNALLQMLNP LTYFESQSYL NLVI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	7e-75	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIV99175