PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV98194

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 490aa MW: 53964.6 Da PI: 6.7425

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV98194	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	60	5.8e-19	108	194	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L+ea++++ ++l+rg+l++ +Weev+ ++ r + ++s +qCk+k +nl+kryk ++++ +++ + s s++p+f+++e OIV98194 108 EWSDAAIVCLLEAYTDKFTQLNRGNLRGRDWEEVATVVsdRCENQSKSVEQCKNKVDNLKKRYKLERHRVNSG-CISISHWPWFKHME 194 5***********************************88888999**********************8.999********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MASCDDDDDF SLLHHHHHQP YPQHHHFSSA ASTAVPVQSK SVSVDAEDYE NPFGDENIEK 60 RKDREEIGDE TTLSYGYNKR SKTNSIVSGD GGSGRSGASG EYRKDREEWS DAAIVCLLEA 120 YTDKFTQLNR GNLRGRDWEE VATVVSDRCE NQSKSVEQCK NKVDNLKKRY KLERHRVNSG 180 CISISHWPWF KHMEQIVGNS LPSKFSDEDK AVVVSSAGNS PRQSKRYGVA TPSNGAHLNS 240 MKSKPLPNLR WRRVILKISG AALTGSDTCN IDPKVAMLVS REVAIAARLG VEVAIVVGGR 300 NFFCGDAWVT ATGLERCTAY QVGMMATMMN SILLQSTLEK LGVQTRVQTT VAMQEFAEPY 360 NRQRAIRHLE KGRVVIFGGI GFGTGNPLFS TDIAAALRAS ELNAEAVLKG TNIDGVYDCN 420 SRDNNFTFEH ISFRELVSRG ATSMDMLALT FCEENAIPVV VFNLLEPGNI SKALCGEQVG 480 TLIDQTGAIS

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MASCDDDDDF SLLHHHHHQP YPQHHHFSSA ASTAVPVQSK SVSVDAEDYE NPFGDENIEK  60
RKDREEIGDE TTLSYGYNKR SKTNSIVSGD GGSGRSGASG EYRKDREEWS DAAIVCLLEA  120
YTDKFTQLNR GNLRGRDWEE VATVVSDRCE NQSKSVEQCK NKVDNLKKRY KLERHRVNSG  180
CISISHWPWF KHMEQIVGNS LPSKFSDEDK AVVVSSAGNS PRQSKRYGVA TPSNGAHLNS  240
MKSKPLPNLR WRRVILKISG AALTGSDTCN IDPKVAMLVS REVAIAARLG VEVAIVVGGR  300
NFFCGDAWVT ATGLERCTAY QVGMMATMMN SILLQSTLEK LGVQTRVQTT VAMQEFAEPY  360
NRQRAIRHLE KGRVVIFGGI GFGTGNPLFS TDIAAALRAS ELNAEAVLKG TNIDGVYDCN  420
SRDNNFTFEH ISFRELVSRG ATSMDMLALT FCEENAIPVV VFNLLEPGNI SKALCGEQVG  480
TLIDQTGAIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	0.0	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIV98194