PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIV98070

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 315aa MW: 33896 Da PI: 6.1628

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV98070	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.0003	109	131	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs++ L H++ H OIV98070 109 FSCNFCKREFSSSQALGGHQNAH 131 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MATTNGVDPC ASEAFSISAT SEDQKMNLKE KNAKSEQEQA SISNTPSQLL DFMKLNSNGD 60 SVSDSKVELD LLNQTGNNNM VGSSSRVHNN NNNTAEGTDE NTKNEAKSFS CNFCKREFSS 120 SQALGGHQNA HKQERALAKR RQGLDASGGG FGHPYYPSYP TLSTHSFYGS YNRALGIRMD 180 SMIHKPSYPS WASPNGFKYG GSPWFRQGGQ EMLSSSTSSP LDRLRIEGLQ QLQSHNGDSG 240 GLGFLGGSDV SSRLEDNDGN NNCNVGTLSL SKNIATTSSI QVMNKPIQST VFDPPPPQGT 300 SKGESSDDLD LSLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25160.1	2e-25	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV98070