PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV97488

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 385aa MW: 44491.9 Da PI: 5.513

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV97488	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	85.3	7.8e-27	73	153	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li +rrem+ ++++k++k+lW+++s+kmr++gf rsp++C++kw+nl k++kk k++++++ ss+++y+++++ OIV97488 73 WVQDETRNLISLRREMDALFNTSKSNKHLWDQISAKMRDKGFDRSPTMCTDKWRNLLKEFKKAKHQDNRG----SSKMSYYKEID 153 ******************************************************************98....66888*997 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MYSLEKPRPI DFYKEEEETP EMMIEVVPTT DNNNNHHLQQ PPPPPPPLML TESSGDDPEL 60 DQIKAPKKRA ETWVQDETRN LISLRREMDA LFNTSKSNKH LWDQISAKMR DKGFDRSPTM 120 CTDKWRNLLK EFKKAKHQDN RGSSKMSYYK EIDEILRERS CKSVHYKTPI PPTLSKVDSF 180 MHFADKGIED TSISFGPVEA NGRPTLNLER SLDHDGHPLA ITTADAVAAS GVPPWNWRET 240 PDNGGESQSC CGRVISVKWG DYTRRIGIDG TAEAIKEAIR SAFRLRTRRA FWLEDEEQII 300 RSIDRDMPLG NYTLHLDEGM AVKVCLYDES DHISVHTEEK IFYTEDDYRD FLTRRGWTCL 360 REFDGYRNID NMDDLRPGAI YRGVS

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MYSLEKPRPI DFYKEEEETP EMMIEVVPTT DNNNNHHLQQ PPPPPPPLML TESSGDDPEL  60
DQIKAPKKRA ETWVQDETRN LISLRREMDA LFNTSKSNKH LWDQISAKMR DKGFDRSPTM  120
CTDKWRNLLK EFKKAKHQDN RGSSKMSYYK EIDEILRERS CKSVHYKTPI PPTLSKVDSF  180
MHFADKGIED TSISFGPVEA NGRPTLNLER SLDHDGHPLA ITTADAVAAS GVPPWNWRET  240
PDNGGESQSC CGRVISVKWG DYTRRIGIDG TAEAIKEAIR SAFRLRTRRA FWLEDEEQII  300
RSIDRDMPLG NYTLHLDEGM AVKVCLYDES DHISVHTEEK IFYTEDDYRD FLTRRGWTCL  360
REFDGYRNID NMDDLRPGAI YRGVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	0.0	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIV97488