PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV97286
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 305aa    MW: 34184.6 Da    PI: 4.9453
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV97286genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF306.9e-10958144
              S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-E......EEEEEE-TTS CS
    SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdae......vaviifsstg 44
              kri n+  r++tf +Rr  +l K +ELS LC+ae      +++i++  +g
  OIV97286  9 KRIANDASRKTTFKQRRDVLLNKMQELSKLCNAEegeaakACLIVYNING 58
              79*****************************8643333338999886554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MGRSRLTLKR IANDASRKTT FKQRRDVLLN KMQELSKLCN AEEGEAAKAC LIVYNINGGD  60
PQLVTWPENL KADHSLIQKY ENEKNEEPPV MFGIQDYFKN KKDKVEADIS KVRKEILKIQ  120
YPTSHPCLNS LGDEQIRNFI AVLDAKSKAC NERMNMLKWQ HQVEVINSAQ TSSAALNSSQ  180
VNFTPNNFQT QLIPTPMKPF DDDSNHIAST MKHDMGSHSQ VLHIDPNPMQ LMANDNGVID  240
SANQIGLPLD RAIQLGSPNP VGVPVDCTEP SNPAIDSTNQ LDELDWGSLF DGLIDGDFDI  300
DFMNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31630.17e-11M-type_MADS family protein